Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00938 ATGGATCAGTATCAGAAGACTTTGGGGGATATCGATCTGTGGCGTTCCCATTATGAGAAAATGCTTGATAACTTGAAGAAACTGAAAGATATTAACAATAAACTCAGAAGACAGATCAGGCATAGGATAGGTGAGGGTTTGGATTTGGAGGATCTGAGCTTCCAGCAGCTGCGCAATCTTGAAGAGGATATGGTTTCTTCCATAGGGAAAATACGCGAAAGGAAGGTGCGATCTTTCTAA 240 0.4167 MDQYQKTLGDIDLWRSHYEKMLDNLKKLKDINNKLRRQIRHRIGEGLDLEDLSFQQLRNLEEDMVSSIGKIRERKVRSF. 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00938 79 Coils Coil 18 38 - -
Seca10g00938 79 ProSiteProfiles K-box domain profile. 18 79 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca10g00938 79 Pfam K-box region 16 76 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00938 Seca-Chr10 8977996 8979365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00938 1 79 MADS-box Gene Family AT3G54340 43.038 1.05e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00938 K09264 - gmx:100784496 128.642