Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00934 ATGGAATGGATATTGTCACTATGGGTTGTGATGGGTTTTCTCTTGTTAATGAGTTGGTGGTTTCTGTGTGGGAAGAAGGAGAATACGACGTCGCTGGGTAACAAAATTCCAAAAGGGAACTCCGGTTGGCCTTTACTTGGAGAGACCCTTGATTTCATTGCTTCTGGCTACACCTTCTTGGAAAACCGCAAGTCTCTGTACGGGAATGTGTTTCAGACAAGCATTTTGGGAAGCAGTGTGATAGTGTCGACTGACCCGGAAGTGAACAAGGTGGTTCTGCAGAACCAGGGGAACGTGTTCGTCCCTGCTTATCCAAAATCAATTAGAGAATTAATGGGAGAACACTCTATCCTCCAAATGAATGGCAACAGGCATAGGAAGTTCCATGGTCTCATCGGAGCCTTCCTGAAATCCCCACATCTCAAAGCTCGAATCACCACAGACATTCAACTCTCTGTCAAACAATGCCTCGCTTCTTGGACCCACCAACCAATAATATACGTTCAAGATCAAGTCAAAAAGATTACATTTACTGTTTTGGTTAAAGTTTTGATGAGCCTTGGTCCTGGTGAAGATCTGGATTTCCTCAAGACAGAATTTGAAGAATTCATCAAAGGCTTGATTTGCTTACCCCTCAACTTTCCAGGAACAACACTATATAAATCCTTGAAGGCTAAGGAAAGGATGGTGAAGATGGTGAAAAGGATAATAGAAGAGAGGAAGAAGGAAATAGTTGTTAATGAGGAGGCAGTAGTGAATAATGATGTGGTGGACGTACTCTTAAGGGATCAGTCCCAGTCATCAGAAATGATGAGTGAAAACATTATTGAGATGATGATACCAGGAGAGGAGACCCTTCCTACGGCAATGACCATGGCCCTCAACTTCCTCAATCACTCCCCTCCAGCCCTATCCAAACTCATGGAGGAGAACATGGAATTAAAGAGGCAGAAGACTAATTGCTCATGGACTGATTACATGTCACTTCCATTTACTCAAAATGTCATCAGCGAAACTCTGAGAATGGCAAATATTGTCAATGGCATTTGGAGAAAAGCAGTCAAAGACGTGGAAATTAAAGGGTACCTAATTCCAAAGGACTGGTGTGTCATGGCATCTCTTACCTCTGTTCACATGGACGCCAACAATTATGAAAACCCTTTTAACTTTGATCCGTGGAGATGGGAGAAAATTGGAGCTGTGGGTAGTAACAACTGCTTTACCCCATTTGGCGGTGGACCTAGACTATGCCCTGGGTTAGAACTCTCCAGGCTAGAACTCTCTATTTTCCTTCACCATCTTGTTACTACTTACAGGTGGGTGGCTGAGAAGGATGAAATAATCTACTTTCCAACGGTCAAGATGAGGAAGAAGCTCCCAATTAGTGTGCAACCCATTAACGCTTGA 1407 0.4335 MEWILSLWVVMGFLLLMSWWFLCGKKENTTSLGNKIPKGNSGWPLLGETLDFIASGYTFLENRKSLYGNVFQTSILGSSVIVSTDPEVNKVVLQNQGNVFVPAYPKSIRELMGEHSILQMNGNRHRKFHGLIGAFLKSPHLKARITTDIQLSVKQCLASWTHQPIIYVQDQVKKITFTVLVKVLMSLGPGEDLDFLKTEFEEFIKGLICLPLNFPGTTLYKSLKAKERMVKMVKRIIEERKKEIVVNEEAVVNNDVVDVLLRDQSQSSEMMSENIIEMMIPGEETLPTAMTMALNFLNHSPPALSKLMEENMELKRQKTNCSWTDYMSLPFTQNVISETLRMANIVNGIWRKAVKDVEIKGYLIPKDWCVMASLTSVHMDANNYENPFNFDPWRWEKIGAVGSNNCFTPFGGGPRLCPGLELSRLELSIFLHHLVTTYRWVAEKDEIIYFPTVKMRKKLPISVQPINA. 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00934 468 CDD CYP90-like 63 465 - -
Seca10g00934 468 PRINTS E-class P450 group IV signature 401 417 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00934 468 PRINTS E-class P450 group IV signature 58 81 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00934 468 PRINTS E-class P450 group IV signature 329 345 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00934 468 PRINTS E-class P450 group IV signature 417 435 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00934 468 PRINTS E-class P450 group IV signature 378 396 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00934 468 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 26 466 - -
Seca10g00934 468 Pfam Cytochrome P450 37 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00934 468 PRINTS P450 superfamily signature 408 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00934 468 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00934 468 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00934 468 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00934 468 SUPERFAMILY Cytochrome P450 35 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00934 468 Gene3D Cytochrome P450 26 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00934 468 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 410 419 IPR017972 GO:0005506|GO:0016705
Seca10g00934 468 PANTHER CYTOCHROME P450 26 36 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00934 Seca-Chr10 8945989 8948982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00934 29 439 Cytochrome P450 AT3G13730 51.537 5.90e-158 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00934 K12637 - gmx:100799030 723.776