Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00929 ATGGTGCCTGAACGAGCTAAGCTGCACATAGCCTTAACGTTTTTACAATTCTGCCATGCTGGAAATCATATATTTCTGAGAATTGCACTTAATACAGGAGTGAGCAAGCTTGTCTTTCCTGTCTATAGAAACATTACCGCTCTTCTTCTTCTGGGACCCCTCGCATATTTTTCAGATAAGAAAGACAGGCCACCAATAACAAGTTATATTCTGCTACAATTTTTCCTACTTGGACTTGTTGGAATAACAATGAAAGAAGGATTCTACCTCTTGGGTTTGGAGATCACATCACCAACGTTTGCTGCTGCTATGCAGAATTCTGTTCCAGCCCTGACCTTTCTGATGTCTGCGGTACTCAGATGTGAACTTGTGAAGTGCAGATATGAGAGTGTGCACTTGAATATGATAGATGGTGTGGCTAAGGTCCTTGGAGTCCTTGCTTCTGTTGGAGGAGCTTCAGTCATTACCCTTTACAAGGGACCTACCATTTATACTCCACATTCAGCATCCCACCAGGAAAATTTCTTGTCTGCATTTGGGGATGCCACAGGGAAAAACTGGAACTTGGGTGGCATCTTTCTGTTTGGTCACAGCTTATGTTGGTCTGGTTGGATTGTGATGCAAGCATTTGTTCTTAAAAAATACTCAGCCCCACTCACAGTTTCTGCCTTTACTTGCTTCTTTGGTATTGTGCAATTTGTGACAATTGCAACCTTTTTCGAGAAGGATCCAAAAGCCTGGCAGCTCAATTCTAGAAGAGAGATCTACAGTGTTTTGTACTCGGGACTGGTGACTTCAGGGCTGGCAGCAGCAATACAGATATGGACTATTGGCAAGGGAGGACCAGTGCTTGCTTCAATTTATCTGCCCTTACAGACATTACTCGTAGCATTGATGGCATCCATTGTTTTTGGCGAAGAATTCTTTTTGGGAGGGATTATCGGAGCTTTCTTAATTATATCTGGCTTGTACCTTGTTGTATGGGGAAGAAGTCAAGAAACCAAGTATGCCAAAGAGTTCATAGTCCCCATTGAACCTGAGAACCATTGGGAAGAAAAAAGTCACAGTTCTTCCCTCATCCAACCACTCATTCCTACGCATAACTCTTAG 1110 0.4288 MVPERAKLHIALTFLQFCHAGNHIFLRIALNTGVSKLVFPVYRNITALLLLGPLAYFSDKKDRPPITSYILLQFFLLGLVGITMKEGFYLLGLEITSPTFAAAMQNSVPALTFLMSAVLRCELVKCRYESVHLNMIDGVAKVLGVLASVGGASVITLYKGPTIYTPHSASHQENFLSAFGDATGKNWNLGGIFLFGHSLCWSGWIVMQAFVLKKYSAPLTVSAFTCFFGIVQFVTIATFFEKDPKAWQLNSRREIYSVLYSGLVTSGLAAAIQIWTIGKGGPVLASIYLPLQTLLVALMASIVFGEEFFLGGIIGAFLIISGLYLVVWGRSQETKYAKEFIVPIEPENHWEEKSHSSSLIQPLIPTHNS. 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00929 369 Pfam EamA-like transporter family 190 327 IPR000620 GO:0016020
Seca10g00929 369 Pfam EamA-like transporter family 16 119 IPR000620 GO:0016020
Seca10g00929 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 331 - -
Seca10g00929 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 122 - -
Seca10g00929 369 PANTHER WAT1-RELATED PROTEIN 10 338 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00929 Seca-Chr10 8900623 8902901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00929 2 337 Nodulin-like Gene Family AT1G75500 58.772 1.96e-140 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00929 - - gmx:100790386 593.964