Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00873 ATGTCTGACTCACACCTAACTTTCTATTCTCTCTCTTCTTCTTCTACTCTTCTTCTTCTTCCACTCTTCATCTTCATTCTCATTCTCATCAAAAGAAAGCTAGCTAGACCCAAGCTTAATCTTCCCCCAGGGAAAATGGGTTGGCCATTTCTGGGTGAAACCATTGGGTATTTGAAGCCTTATTCTGCTACTACAATAGGAGAATTCATGGACCAACACATAGCAAGGTATGGTAAAATTTACAAGTCCAAATTGTTTGGTGAGCCAGCAATAGTGTCAGCAGATGCAGGGCTGAATAGGTTCATATTACAGAACGAAGGGAAATTGTTTGAATGCAGCTATCCTAGAAGCATTGGTGGAATACTCGGAAAATGGTCTATGTTGGTTTTGGTTGGTGACATGCATAGAGACATGAGGGTTATATCACTCAACTTTCTAAGCCATGCCAGACTCAGAACACATCTGTTAAAAGAGGTGGAGAAACATACCCTTTTGGTTCTAAACTCTTGGAAGGAAAATTCCACTTTCTCAGCTCAAGATGAAGCAAAGAAGTTCACCTTCAATTTGATGGCACAACATATCATGAGCCTGCAACCTGGGAATATCGAGACAGAGCAACTAAAGAAAGAGTATGTCACTTTCATGAAAGGGGTGGTATCGGCGCCATTGAATTTACCAGGAACTGCATACAGGAAGGCATTGAAGTCTAGGTCCATCATACTGAAGTTCATAGAGGGGAAAATGGAAGAAAGGATCAAAAGAATCCAAGACGGAAATGAAAGTTCAGGGGAAGATGATCTTCTAAACTGGGTTTTGAAGCATTCAAATCTTTCAACTGAGCAAATCCTTGACTTGATCTTAAGCTTGCTCTTTGCTGGCCATGAAACTTCATCTGTAGCTATAGCTTTAGCTATTTACTTCTTACCCGGTTGTCCTCAAGCTATACAGCAGTTAAGGGAAGAGCACATAGAGATTGCCAGAGCCAAGAAGCAAGCAGGGGAAGTTGAATTGACTTGGGATGACTATAAGCAAATGGAATTTACTCACTGTGTTGTGAACGAGACACTTAGGCTGGGAAATGTTGTGAGGTTTCTTCACAGGAAGGCTGTGAAAGATGTTCGGTATAAAGGTTATGACATTCCATGTGGATGGAAAGTCCTTCCGGTGATTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGAACAATGGTGGTGGTCGTGGAAGTTGTGTGAGTTCAAGCACAGTGAACAATAACTTTCTGCCATTCGGTGGAGGACCACGACTATGTGCGGGATCAGAGTTAGCCAAACTTGAAATGGCAGTTTTCATCCACCATCTCATCCTCAACTACAATTGGGAATTGGCTGATACTGATCAACCTTATGCCTACCCTTTTGTCGATTTTCCCAAAGGCCTACCCATCAGGGTCCAAACCCACTCTTTGGTTTGA 1485 0.4256 MSDSHLTFYSLSSSSTLLLLPLFIFILILIKRKLARPKLNLPPGKMGWPFLGETIGYLKPYSATTIGEFMDQHIARYGKIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVEKHTLLVLNSWKENSTFSAQDEAKKFTFNLMAQHIMSLQPGNIETEQLKKEYVTFMKGVVSAPLNLPGTAYRKALKSRSIILKFIEGKMEERIKRIQDGNESSGEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPGCPQAIQQLREEHIEIARAKKQAGEVELTWDDYKQMEFTHCVVNETLRLGNVVRFLHRKAVKDVRYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQHFNPWRWQNNGGGRGSCVSSSTVNNNFLPFGGGPRLCAGSELAKLEMAVFIHHLILNYNWELADTDQPYAYPFVDFPKGLPIRVQTHSLV. 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00873 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Seca10g00873 494 PANTHER CYTOCHROME P450 26 37 469 - -
Seca10g00873 494 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00873 494 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00873 494 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00873 494 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00873 494 PRINTS E-class P450 group I signature 281 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00873 494 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00873 494 CDD CYP90-like 73 488 - -
Seca10g00873 494 FunFam Cytochrome P450 90B1 31 490 - -
Seca10g00873 494 Pfam Cytochrome P450 42 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00873 494 SUPERFAMILY Cytochrome P450 38 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00873 494 Gene3D Cytochrome P450 31 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00873 494 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00873 494 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00873 494 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00873 494 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00873 Seca-Chr10 8376471 8382281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00873 31 412 Cytochrome P450 AT3G50660 75.931 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00873 K09587 - gmx:100802498 878.241