Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00855 ATGGACCAGAACGGCTTCGATTTCATCGAAGAGCTTATCCGCGCCGCTGATTGCTTCGACAGCAACCAGCTACAACTGGCGCAGGTGATATTGGAGCGGCTCAATCAACGGCTACGATCTCCCGTGGGAAAACCCCTTCAGCGAGCGGCGTTTTACTTCAAAGAAGCTCTCCAGTCCCTTCTCTCCGGTTCGAACCGGACGCCACGGCTTTCTTCCTTGGTGGAAATCGTGCACAGTATCAGAACCTTCAAGGCCTTCTCCGGAATCTCTCCCATTCCAATGTTCTCCATCTTCACCACCAACCAAGCACTCCTCGAAGCGCTTCAGGTTCACGCCTCTTCATTCCTCCACGTCATCGACTTCGATATTGGCCTCGGGATTCAATACGCTTCTCTCATGAAGGAGATTGCGGAGAAGGTAGAGTCCTGCAAAATCGCCTCACCTCTCCTCCGCATCACCGCCGTTGTTCCTGAAGAGTACGCCGTCGAGAGCACGCTCATCCGCGAGAATCTCACTCAGTTCGCTCAGGAACTCAGGATCCGAGTCCAGGTTGAGTTCGTGCTGCTCCGAACCTTTGAGACGCTGTCCTTTAAGGCAATCAAGTTCGTCGACGGAGAGAAGACCGCCGTTCTCTTGTCTCCGGCGATCTTCCGCCGCCTCGTCTCAGCCGCGGCGTTTCTGGCGGACGTGCGGAGTGTCTCTCCATGCGTGGTGGTTTTCGTGGACGGCGAAGGATGGGCGGAGGCAGCGGCGGCGTCGACGTTCAGGCGCGGCGTGGTGAGCAGCTTGGAGTTCTACTCGATGATGCTGGAGTCGCTGGATGCCTCGATCGTGGGAGGAGGAGGTGAATGGGTGAGGAGGATTGAGATGCTGCATCTACGCCCCAAGATAATGGAGGCGGTGGAAGGGACTGGACGGCGAATGCCGCCGTGGAGGGAGGCGTTTTACGGTGCGGGCATGAGGCCGGTACAGTTAAGCCAGTTCGCGGATTTTCAAGCAGAGTGTTTGTTGGCCAAGTCACATATCAGGGGCTTCCACGTGGCCAAGCGTCAGGCTGAGCTGGTGCTCTTCTGGCATGAGCGGGCCATAGTTACCACGTCAGCTTGGCGGTTGGACTCCGTTTGCTTCTTTGCCCTGTTGGTTCCAACATTGTAG 1155 0.568 MDQNGFDFIEELIRAADCFDSNQLQLAQVILERLNQRLRSPVGKPLQRAAFYFKEALQSLLSGSNRTPRLSSLVEIVHSIRTFKAFSGISPIPMFSIFTTNQALLEALQVHASSFLHVIDFDIGLGIQYASLMKEIAEKVESCKIASPLLRITAVVPEEYAVESTLIRENLTQFAQELRIRVQVEFVLLRTFETLSFKAIKFVDGEKTAVLLSPAIFRRLVSAAAFLADVRSVSPCVVVFVDGEGWAEAAAASTFRRGVVSSLEFYSMMLESLDASIVGGGGEWVRRIEMLHLRPKIMEAVEGTGRRMPPWREAFYGAGMRPVQLSQFADFQAECLLAKSHIRGFHVAKRQAELVLFWHERAIVTTSAWRLDSVCFFALLVPTL. 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00855 384 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 364 IPR005202 -
Seca10g00855 384 ProSiteProfiles GRAS family profile. 1 370 IPR005202 -
Seca10g00855 384 Pfam GRAS domain family 9 370 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00855 Seca-Chr10 8163237 8173351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00855 1 371 GRAS Transcription Factor Family AT4G36710 63.492 7.71e-161 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca10g00855 GRAS 2.3e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00855 - - gmx:100807470 582.793