Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00854 ATGGGAACTGGAGAAGAAAGCACAACTAAACCTTCTAAACCATCTTCAACTTCTTCAGCTCAGATACCACTGGCACCTTCATATCCTGACTGGTCAAGCTCCATGCAGGCTTATTATGCTCCTGGAGTCACTCCGCCTCCTTTCTTTGCCTCTACTGTTGCTTCTCCAACTCCTCATCCCTATTTGTGGGGAAGCCAACATCCTCTCATTCCACCATATGGTACTCCTGTTCCATATCCAGCTATATATCCTCCCGGGAGTGTCTATGCTCATCCTAGCATGGCAACGACTCCAAGCACCACACAGCCTGGCACAGAATTTGTAGGCAAGGGTCCTGATGGAAAAGATCGGGTTTCTCCCAAAAATTCAAAGGGTGTATCTGCAAATACTGGTTCTAAAGCAGGAGACAATGGAAATGCAGGCTCGGGGTCAGGAAATGATGGCATCTCACAAAGTGCTGAAAGTGGTTCAGAGGGATCATCAGATGATGTTAATGATGAAAATACTAACCAACAGGAATCAGCTACAAACAAGAAGGGTAGCTTTGACCAAATGCTTGTTGATGGAGCCAATGCACAGAACAATTCTGTTGGTGGCATTTCTCAATCAACTGTACCTGGAAAGCCTGTTGGGTCAATATCTGCAACTAATCTTAATATTGGAATGGAATTGTGGAGTGCGTCTTCTGGTGGTGCTGAAGCTGCAAAAATGAGACACAATCCATCTGCTGCTTCAGGAGCTGTTACTCCTTCAACCATAATGGGACGTGAAGTCGCACTTGGTGAACAGTGGATACAAGACGAACGTGAGCTGAAAAGACAGAAGAGGAAACAATCTAATAGAGAGTCAGCTAGGAGGTCAAGACTACGCAAGCAGGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAGTCGTTGGGAAATGAGAATCAAACTTTAAGAGAAGAGCTGAGGAAAGTATCCGAAGAATGCGAGAAGCTTTCATCTGAAAATAATTCTATCAAGGAAGAGTTGAAACGGTTGTGTGGGCCAGAAGCAGTTGCTAACCTTGAATAA 1053 0.4492 MGTGEESTTKPSKPSSTSSAQIPLAPSYPDWSSSMQAYYAPGVTPPPFFASTVASPTPHPYLWGSQHPLIPPYGTPVPYPAIYPPGSVYAHPSMATTPSTTQPGTEFVGKGPDGKDRVSPKNSKGVSANTGSKAGDNGNAGSGSGNDGISQSAESGSEGSSDDVNDENTNQQESATNKKGSFDQMLVDGANAQNNSVGGISQSTVPGKPVGSISATNLNIGMELWSASSGGAEAAKMRHNPSAASGAVTPSTIMGREVALGEQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVESLGNENQTLREELRKVSEECEKLSSENNSIKEELKRLCGPEAVANLE. 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00854 350 SUPERFAMILY Leucine zipper domain 271 327 IPR046347 GO:0003700|GO:0006355
Seca10g00854 350 CDD bZIP_plant_GBF1 273 323 IPR045314 GO:0003700|GO:0006355
Seca10g00854 350 Pfam bZIP transcription factor 268 330 IPR004827 GO:0003700|GO:0006355
Seca10g00854 350 Gene3D - 271 326 - -
Seca10g00854 350 Coils Coil 281 336 - -
Seca10g00854 350 MobiDBLite consensus disorder prediction 1 26 - -
Seca10g00854 350 MobiDBLite consensus disorder prediction 87 209 - -
Seca10g00854 350 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 270 333 IPR004827 GO:0003700|GO:0006355
Seca10g00854 350 MobiDBLite consensus disorder prediction 270 293 - -
Seca10g00854 350 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 345 IPR044827 GO:0003700|GO:0006355|GO:0043565
Seca10g00854 350 SMART brlzneu 268 332 IPR004827 GO:0003700|GO:0006355
Seca10g00854 350 MobiDBLite consensus disorder prediction 122 209 - -
Seca10g00854 350 FunFam BZIP transcription factor 270 321 - -
Seca10g00854 350 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 275 290 IPR004827 GO:0003700|GO:0006355
Seca10g00854 350 MobiDBLite consensus disorder prediction 92 106 - -
Seca10g00854 350 Pfam G-box binding protein MFMR 1 94 IPR012900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00854 Seca-Chr10 8157473 8162775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00854 1 350 bZIP Transcription Factor Family AT4G36730 53.933 1.02e-107 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca10g00854 MFMR 1.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00854 K09060 - gmx:100808533 540.036