Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00847 ATGACTGGCTCGTCGGGAAGGTTGCCGACGTGGAAGGAAAGGGAGAACAATAAGCGGAGAGAGAGAAGAAGAAGAGCGATTGCTGCTAAGATCTATGCAGGCCTTCGAGCTCAGGGGAACTACAAGCTTCCCAAGCACTGTGACAACAACGAGGTCTTGAAGGCTCTATGTGCTGAAGCTGGTTGGATCGTAGAAGAAGATGGCACTACGTATCGAAAGCAGGGAAGCAAGAGACCCCAAACTGAGATTGGAGGCACTCCACCAAATATCAGTGCTTGTTCTTCCATTCAGCCAAGTCCACAATCCTCCTCATTCCCTAGTCCTGTGCCATCCTACCATGCTAGCCCAACTTCATCCTCTTTCCCCAGCCCCACTCGCATTGATGGAAACCCCTCTTCCTTTCTCCTCCCATTCATCCGCAACATAACTTCCATCCCCACAAATCTTCCACCTCTCAGGATATCCAACAGTGCCCCTGTAACCCCACCTCTCTCTTCTCCTAGAAGTTCAAAGCGTAAAGCAGACTTTGAATCCCTCTCTAATGGTTCCCTTAACTCCTTCCGCCACCCCATTTTCGCTACTTCTGCTCCATCAAGCCCCTCACGCCGCCACCACGTGGCCACTTCCACCATTCCAGAATGTGATGAGTCAGATGCTTCCACCGTGGACTCTGGTCGCTGGGTTAGCTTTCAGACAGCAACGGCCTCAGCTGCTGCTCCTCCTTCCCCCACCTTTAATCTCATGAAACCAGCAATGCAGAAGATCACTCCCCAGGATTCCATGGACATGAATGAAGGCATGCAATGGGGTTCAGGTGCTGAGATTGGCAGAGGATCAGATTTTGACTTTGAGAATGGCAGAGTGAAGCCGTGGGAGGGTGAGAGAATCCATGAGGTTGGAATGGAAGAGTTGGAGCTTACTCTAGGGTGTGGAAAGGCCTGA 942 0.5138 MTGSSGRLPTWKERENNKRRERRRRAIAAKIYAGLRAQGNYKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKQGSKRPQTEIGGTPPNISACSSIQPSPQSSSFPSPVPSYHASPTSSSFPSPTRIDGNPSSFLLPFIRNITSIPTNLPPLRISNSAPVTPPLSSPRSSKRKADFESLSNGSLNSFRHPIFATSAPSSPSRRHHVATSTIPECDESDASTVDSGRWVSFQTATASAAAPPSPTFNLMKPAMQKITPQDSMDMNEGMQWGSGAEIGRGSDFDFENGRVKPWEGERIHEVGMEELELTLGCGKA. 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00847 313 MobiDBLite consensus disorder prediction 193 220 - -
Seca10g00847 313 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 4 310 IPR033264 GO:0003700|GO:0006351|GO:0009742
Seca10g00847 313 MobiDBLite consensus disorder prediction 1 22 - -
Seca10g00847 313 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 129 IPR008540 -
Seca10g00847 313 MobiDBLite consensus disorder prediction 149 168 - -
Seca10g00847 313 MobiDBLite consensus disorder prediction 71 126 - -
Seca10g00847 313 MobiDBLite consensus disorder prediction 74 126 - -
Seca10g00847 313 MobiDBLite consensus disorder prediction 149 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00847 Seca-Chr10 8061901 8063965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00847 7 313 BZR Transcription Factor Family AT1G75080 58.333 4.24e-100 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Seca10g00847 BES1_N 2.7e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00847 K14503 - gmx:100812095 441.425