Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00821 ATGGAAGTACTTCCTTGTTCTGGTGTTCAATATGCTGGGGAATCTGATTGCCCTCAACGGAGTTCAGGAACAGCTTTTGTATACCAGGAAGAACCTAATTGCCCCGAAAATGGTGAACAAGCTAAATTGGCAGATGGTCAACTGATTGAATCATCAGATAACATGCAAGGGCCGCATATAGAAAGCCAGGGTGAAGGGAAACAGACTGTTTGTGATTTATTGGCTAATTCAGATTGTCAATGCATTGGAGCTTCATGTAGTGACTGTCAAGTGGAAGATCAAAAGGAATACTGTGGTTTCCATGATTTTGAAGATGACGTGATAAATGGACCTTGCTTAACCTCTGAGAACTCTCTCTCTATTGTGGATACTATTGAAAGTGAATCACCAAACAATAGTAGGGAAGGAGACTTGTCATTTTCTGAACCCAAGTGGCTAGAGGGGGATGGATCTGTGGCATTGTGGGTCAAGTGGAGAGGGAAGTGGCAAGCTGGTATCCGATGTTCAAGGGCTGACTGGCCGTTATCAACTTTGAAAGCAAAACCAACTCATGACCGAAAGAAATATTTTGTCATATTTTTTCCACACACAAGGATTTATTCTTGGGCAGATATGCTGCTTGTTAGATCAATCAATGAGTTTCCCCATCCAATTGCATACAAGACTCATCAGGTAGGATTGAAAATGGTAAAAGACTTAACAGTTGCACGGCGGTTTATAATGCAAAAGCTAGCTGTTGGCATGCTGAACATTGTCGATCAGTTTCATTTTAATGCTTTGACAGAAACTGCCCGTGATGTGAAAGTCTGGAAGGGATTTGCTATGGAGGCTTCTCGTTGCAATGGTTATTCTGATTTTGGAAGAATGCTTATAAAGCTACATAATAGCATACTGCAGCACTACATAAATGCTAACTGGTTGCACCACTCTTCTAATTCTTGGGTTGAACGATGTCAGAGTGCAAATAGCGCCGAATCAGTAGAGCTGCTGAAGGAGGAATTGTTTGATTCTATTTTGTGGAATGATGTCAACACTCTCTGGGATGGACCTGTGCAACCAATGTTAGGTTCTGAATGGAAAACCTGGAAGCATGATGTAATGAAATGGTTTTTGACTTCCCCTTCCTTATCTAGCAGCAAAGGCACACAGCAGCAGATTGCTGATGATTCATACCAAACAAACCTTCAGGTTTGTAGAAAAAGGCCCAAACTTGAAGTTCGTCGTGCAGAAACACATTCTTCACAAGTGGAAATCAAGGGTTCAGATCACTCTATTACTCTTGAGACTGACCCTCTCTTCTTTAAGAATCAGGACACATTGAGCACATTAGCAGCTGAGACTTGTAATAAACAGGAAGATGTTAGGGAGGTATCTTTGGCAACTGATTTTCCTAGTAACTTAACCAATAAATGGAATGAAATTGTAGTTGAGGCTGCTGATTCTGATTTCTTGCATACCAAAGGAATGGAATTGACACCTATAAATGAAATGGCTGTTGCAAAATCTGTAGAACCTGGTAGTAAGAATCGACAGTGTATAGCTTATATTGAATCCAAGGGAAGACAGTGTGTGAGATGGGCAAATGATGGTGACGTATACTGTTGTGTGCATTTGTCATCCCGTTTTTTGGGCAGCTCTTCAAAAGCTGAAAAGCCAGTTCCAGTTGATACTCCTATGTGTGAAGGTACAACTGTTCTGGGTACTAGATGTAAGCACCGGGCCCTACCTGGCTCTTTATTCTGTAAGAAACACCGACCCCATGCTGAAACAGAACAGATCTCAAGTTTACCCCAGAATATACTAAAGAGGAAACATGAAGAAAATTATACTGGTTCAGAGGACATGTTCTGCAAAGACCTGGTATTAGTAGATGTTGAAGGTCCACTGCAAGTGGATCCAGTGTCATCCATTGCTGGTGATACCTTACATGGAGAAAGCAACTTATCTGAGAAGCCCGTGCATTCTGAAAATGATCATAGTGCAATGGAGGCACTGAACTGCATAGGTTCTCCTCCCTACGATAATAGGAATCCTTGTACGGAAGCTCCTAAACGTTATTGCTTGTACTGTGAAAGACACCTTCCGAGCTGGCTTAAACGTGCAAGAAATGGGAAAAGTAGAATAGTATCAAAAGAAGTGTTCACAGAACTTTTGAGGGACTGCAGCTCATGGGAGGAAAAGGTACATCTGCATAAAGCATGTGAGCTTTTTTACAGGCTATTCAAAAGCATTTTATCACTAAGAAACCCAGTTCCTAAGGATGTCCAATTCCAGTGGGCTTTGGCTGAAGCCTCTAAAGATACTTGTGTTGGAGAATTTTTTACGAAGTTGGTTCATCGTGAAAAAGCGAGAATCAAATTGATGTGGGGATTCAATGATGACATAGATCTATCCTCTGTCATGGAAGAACAACCTCTCTTGCCATCCACAATTAATGATAGCTTTGATAATGAAAATGGCATTAAGTGTAAGATATGCTCAGCAGAATTTCCTGATGACCAAGCACTTGGGAACCATTGGATGGACAGTCATAAAAAGGAAGCACAGTGGCTATTTAGAGGTTATGCATGTGCTATTTGTTTGGATTCTTTTACTAACAAGAAACTGTTGGAAACTCATGTTCAGGAGAGACACCATGTGCAATTTGTTGAACAATGCATGCTTCTCCAATGCATTCCTTGTGGTAGTCATTTTGGAAATGCTGAACAATTATGGCAGCATGTTTTATCAGTTCATCCTGTTGATTTTAAGCCATCAAAAGCTACTGAGCAGCAAACTTTGTCTACTGGCGAAGATTCACCAGTAAAACATGACCAGGGAAATTCAGCCTCTTTGGAAAATAATTCTGAGAATGCAGGTGGTTCACGGAAGTTTGTTTGCAGGTTCTGTGGGTTGAAATTTGATTTACTACCTGACCTAGGTAGACATCACCAAGCTGCTCATATGGGGCCCAATCTGGCTAGCAGCCGCCCTGCTAAGAGGGGAGTTCGGTATTATGCATACAAATTAAAATCTGGTAGACTCAGCCGCCCTAGATTTAAAAAAGGTTTGGCAGCTGCATCATACAGGATGAGAAATAAGGCTAATGCTAATTTAAAGCGATGTATTCAGGCAACAAACTCACTTGGAGGGGAAGGAAAAACTGTACAGCCTCAACTAACGGAAACAACAAATATCAGTGGATTGACAGAACATCAATGTTCAGCTGTTGCAAAAATTTTGTTTTCAGAGATTCAGAAAACTAAACCTCGACCTAACAATCTTGATGTTTTATCAATTGCTCGCTCTGCTTGCTGCAGAATTAGTCTTGCAGCCTCACTGGAGGAGAAATATGGAATTTTGCCTAAAAAGCTGTATTTGAAGGCAGCAAAACTGTGCAGCGAGCATAACATTGTTGTGAATTGGCACCAGGAGGGGTTTGTTTGTCCAAGAGGTTGTAATATGTTAAAGGATCAAGCATTGCTCTCTCCTTTAGCATCTCTTCCTAATGGTTCTGTAATGCCAAAATCTGTTAATATATCTGATCCTGCAAGTGATGAGTGGGAGGTGGATGAGTTTCACTGCATCATCAGTTCACCTAGTTTAAAATTTGGTTCACTGCAAAAAGCTATAGTCTTGTGTGATGACATTAGCTTTGGGAAGGAGTCAGTTCCAGTGATATGTGTGGTAGATCAAGAACTTTTGCATTCTCTACATACGCAGAGGTCTGATGAACAAGATATGAACTCTTCTAAACCTTGGGAGAGCTTTACCTATATTACAAAGCCAATGCTTGATCAATCCCTTAGTCTTGATTCAGAGAGTCTGCAAATGGGATGTGCTTGCTCATATTCTACCTGCTGTCCTGAAACATGTGATCATGTATACCTTTTTGGTAATGACTATGTTGATCCAAAAGACATATTTGGGAAACCAATGCGTGGCAGGTTCCCATATGATGAGAATGGTCGAATAATATTGGAGGAAGGTTACCTTGTCTATGAGTGTAACCATATGTGCAGGTGCAATAAATCCTGTCCAAACAGAGTATTGCAGAATGGAGTACGAGTCAAACTGGAAGTCTTCAAAACAGAGAAAAAGGGATGGGCGTTAAGGGCTGGTGAAGCTATTCTACGTGGCACATTTGTGTGCGAGTACATTGGAGAGGTTTTAGATGTGCAGGAAGCACACAACAGGCACAAGAGCAATACCAGATATGGCACAGGGAATTGCAGTTATTTCTATGACATCAATGCTCATGTTAATGATATGAGCAGATTGATTGAAGGGCAGGCCCAATATGTAATTGATGCTACTAAATATGGAAATGTGTCAAGGTTCATCAATCATAGCTGCTCGTCCAATCTTGTCAGTCACCAAGTTCTCATAGAGAGCATGGATTGTGAGCGTACACATATTGGTCTTTATGCAAGTCGAGATGTAAGTACTCTTATCTACCGTCTACTGGCCTATTTCCTTGAGAATGATCCAATGTCTATGATGCTGATTAATTTCCACACTCATTTTTTCTTGATATGGTATATGATATATCTGATTGGTATGGGAGGAGGTAAGCCAAAGAAAGAAACATGA 4572 0.4092 MEVLPCSGVQYAGESDCPQRSSGTAFVYQEEPNCPENGEQAKLADGQLIESSDNMQGPHIESQGEGKQTVCDLLANSDCQCIGASCSDCQVEDQKEYCGFHDFEDDVINGPCLTSENSLSIVDTIESESPNNSREGDLSFSEPKWLEGDGSVALWVKWRGKWQAGIRCSRADWPLSTLKAKPTHDRKKYFVIFFPHTRIYSWADMLLVRSINEFPHPIAYKTHQVGLKMVKDLTVARRFIMQKLAVGMLNIVDQFHFNALTETARDVKVWKGFAMEASRCNGYSDFGRMLIKLHNSILQHYINANWLHHSSNSWVERCQSANSAESVELLKEELFDSILWNDVNTLWDGPVQPMLGSEWKTWKHDVMKWFLTSPSLSSSKGTQQQIADDSYQTNLQVCRKRPKLEVRRAETHSSQVEIKGSDHSITLETDPLFFKNQDTLSTLAAETCNKQEDVREVSLATDFPSNLTNKWNEIVVEAADSDFLHTKGMELTPINEMAVAKSVEPGSKNRQCIAYIESKGRQCVRWANDGDVYCCVHLSSRFLGSSSKAEKPVPVDTPMCEGTTVLGTRCKHRALPGSLFCKKHRPHAETEQISSLPQNILKRKHEENYTGSEDMFCKDLVLVDVEGPLQVDPVSSIAGDTLHGESNLSEKPVHSENDHSAMEALNCIGSPPYDNRNPCTEAPKRYCLYCERHLPSWLKRARNGKSRIVSKEVFTELLRDCSSWEEKVHLHKACELFYRLFKSILSLRNPVPKDVQFQWALAEASKDTCVGEFFTKLVHREKARIKLMWGFNDDIDLSSVMEEQPLLPSTINDSFDNENGIKCKICSAEFPDDQALGNHWMDSHKKEAQWLFRGYACAICLDSFTNKKLLETHVQERHHVQFVEQCMLLQCIPCGSHFGNAEQLWQHVLSVHPVDFKPSKATEQQTLSTGEDSPVKHDQGNSASLENNSENAGGSRKFVCRFCGLKFDLLPDLGRHHQAAHMGPNLASSRPAKRGVRYYAYKLKSGRLSRPRFKKGLAAASYRMRNKANANLKRCIQATNSLGGEGKTVQPQLTETTNISGLTEHQCSAVAKILFSEIQKTKPRPNNLDVLSIARSACCRISLAASLEEKYGILPKKLYLKAAKLCSEHNIVVNWHQEGFVCPRGCNMLKDQALLSPLASLPNGSVMPKSVNISDPASDEWEVDEFHCIISSPSLKFGSLQKAIVLCDDISFGKESVPVICVVDQELLHSLHTQRSDEQDMNSSKPWESFTYITKPMLDQSLSLDSESLQMGCACSYSTCCPETCDHVYLFGNDYVDPKDIFGKPMRGRFPYDENGRIILEEGYLVYECNHMCRCNKSCPNRVLQNGVRVKLEVFKTEKKGWALRAGEAILRGTFVCEYIGEVLDVQEAHNRHKSNTRYGTGNCSYFYDINAHVNDMSRLIEGQAQYVIDATKYGNVSRFINHSCSSNLVSHQVLIESMDCERTHIGLYASRDVSTLIYRLLAYFLENDPMSMMLINFHTHFFLIWYMIYLIGMGGGKPKKET. 1524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00821 1523 ProSitePatterns Zinc finger C2H2 type domain signature. 823 844 IPR013087 -
Seca10g00821 1523 ProSitePatterns Zinc finger C2H2 type domain signature. 891 912 IPR013087 -
Seca10g00821 1523 ProSiteProfiles Pre-SET domain profile. 1271 1347 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Seca10g00821 1523 SUPERFAMILY SET domain 1199 1475 IPR046341 -
Seca10g00821 1523 MobiDBLite consensus disorder prediction 920 952 - -
Seca10g00821 1523 Pfam Zinc finger C2H2-type, 3 repeats 857 982 IPR040689 -
Seca10g00821 1523 Gene3D Classic Zinc Finger 816 887 - -
Seca10g00821 1523 SMART set_7 1350 1486 IPR001214 GO:0005515
Seca10g00821 1523 Pfam Pre-SET motif 1210 1342 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Seca10g00821 1523 ProSiteProfiles SET domain profile. 1350 1485 IPR001214 GO:0005515
Seca10g00821 1523 ProSiteProfiles Zinc finger C2H2 type domain profile. 958 986 IPR013087 -
Seca10g00821 1523 SMART c2h2final6 889 912 IPR013087 -
Seca10g00821 1523 SMART c2h2final6 958 981 IPR013087 -
Seca10g00821 1523 SMART c2h2final6 855 878 IPR013087 -
Seca10g00821 1523 SMART c2h2final6 821 844 IPR013087 -
Seca10g00821 1523 Gene3D SET domain 1193 1477 IPR046341 -
Seca10g00821 1523 ProSiteProfiles Zinc finger C2H2 type domain profile. 855 878 IPR013087 -
Seca10g00821 1523 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1475 - -
Seca10g00821 1523 ProSitePatterns Zinc finger C2H2 type domain signature. 960 981 IPR013087 -
Seca10g00821 1523 Pfam SET domain 1361 1475 IPR001214 GO:0005515
Seca10g00821 1523 SMART preset_2 1207 1334 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00821 Seca-Chr10 7770282 7784162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00821 135 1476 C2H2 Transcription Factor Family AT2G23740 52.318 0.0 1383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Seca10g00821 Pre-SET 1.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00821 - - gmx:100786757 2528.44