Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00800 ATGAAGTTTGTATATAAGCCCTTTGCATTAATTAATTTAGTACTCAACAAAGTCATGGACATGGATGCTTTCCAGTTCAAAACTCTCATTTCAAGCATTCTTGTTCTTTTAGTCTGTGCCTTGATTTATCACTTAAAGAAAAAACACAGTCGTAATACAAAGATTTGTAGTGCACCTCAAGCTGGAGGTGCATGGCCTATTATTGGCCATTTGCACCTCTTCAGGGGTCAACAACTTACACACAGAACTCTAGGGAATATGGCTGATAAACATGGACCAATTTTTACGATAACACTTGGTTCATACAAAGTTCTAGTATTGAGTAGCTGGGAGATGGCCAAGGAATGTTTTACTGTCCATGACAAAGCATTCTCCACCAGGCCCTGCGTTGCATCCTCAAAGTTATTGGCCTACAACTATGCCATGTTTGGCTTCGCTCCTTATGGGCCTTACTGGCGTGAGATGAGGAAGTTAGCTACAATTGAGCTTCTATCAAACCACCGGCTTGAACTGCTCAAGAACATAAGAATATCTGAGTTAGAGGCTGCAATAAGGGAGCTTTACAAGTTATGGTCAAGTGAAGGTTGTCCAATGGGAGGGGTTTTGGTAGATATGAAGCAGTGGTTTGTGGATTTGATGCATAATATTGCTCTGAGAATGGTGGTAGGGAAGCAATACTATGGGGCTAGTGATGATTATGCAGAAGGTGAAGCAAGAAGGTATAAGAAAGCTATGAGAGACTGTATTTGTTTGTTAGGAGTGTTTGTGTTGTCTGATGCAATTCCATTTCTGGGGTGGTTAGACTTAGACATCAGTGGATATGAAAAGGCTATGAAGAGAACTGCTAGTGAATTGGACACACTGGCTGAAGGGTGGTTGGAGGAACACAAAAGGAAAAGAGCCTTGAGTGACAATGGAAAGGAAGAACAGGATTTCATGGACGTCATGCTGAATGTTATGCAGGATGCAGAGATTTCTGGTTATGATTCAGATACCATCATCAAGGCTACTTGCCTGGTAAATCTGATTTTAGCAGGAAGTGACACCACCGTGGTGACTCTGACATGGGCACTATCTCTGCTACTCAACCATCCAATGGAACTTAAAAAAGCCCAAGATGAGTTGGATACTCATATTGGTAAGGACAGGAAGGTGGAAGAATCTGACATAAAGAACTTGGTGTACCTCCAAGCCATTGTTAAGGAAACGTTGCGCCTCTATCCAGCAACTCCCATCATCACCTTCCGTGCAGCCATGGATGACTGCACTTTTTCATGTGGTTATCACATTCCTGCTGGTACACATTTGATGGTGAATGCTTGGAAGATCCACCGGGATGGTCGTGTTTGGCCTGATCCTCATGATTTCAAGCCTGAAAGGTTCTTGACAAGCCACAAAGATGTTGATGTGAGAGGTCAGAACTTTGAGCTCGTCCCTTTTGGTTCCGGAAGGCGAGCATGCCCCGGGGCCTCATTGGCTCTGAAAGTGCTGCCCCTGACACTGGCTACACTGTTACACTCTTTCAATGTTTCTTCTCCTTCAAATCAAGTTGTGGACATGACAGAAAGCTTTGGACTCACGAATTTAAAAGCAACCCCGCTTGATGTTGTCCTAACTCCGCGTCTAGACACCAAGCTTTATGAGAATTAG 1650 0.4345 MKFVYKPFALINLVLNKVMDMDAFQFKTLISSILVLLVCALIYHLKKKHSRNTKICSAPQAGGAWPIIGHLHLFRGQQLTHRTLGNMADKHGPIFTITLGSYKVLVLSSWEMAKECFTVHDKAFSTRPCVASSKLLAYNYAMFGFAPYGPYWREMRKLATIELLSNHRLELLKNIRISELEAAIRELYKLWSSEGCPMGGVLVDMKQWFVDLMHNIALRMVVGKQYYGASDDYAEGEARRYKKAMRDCICLLGVFVLSDAIPFLGWLDLDISGYEKAMKRTASELDTLAEGWLEEHKRKRALSDNGKEEQDFMDVMLNVMQDAEISGYDSDTIIKATCLVNLILAGSDTTVVTLTWALSLLLNHPMELKKAQDELDTHIGKDRKVEESDIKNLVYLQAIVKETLRLYPATPIITFRAAMDDCTFSCGYHIPAGTHLMVNAWKIHRDGRVWPDPHDFKPERFLTSHKDVDVRGQNFELVPFGSGRRACPGASLALKVLPLTLATLLHSFNVSSPSNQVVDMTESFGLTNLKATPLDVVLTPRLDTKLYEN. 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00800 549 Gene3D Cytochrome P450 42 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00800 549 SUPERFAMILY Cytochrome P450 64 541 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00800 549 PANTHER CYTOCHROME P450 82C3-RELATED 35 547 - -
Seca10g00800 549 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 480 489 IPR017972 GO:0005506|GO:0016705
Seca10g00800 549 PRINTS E-class P450 group I signature 397 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00800 549 PRINTS E-class P450 group I signature 487 510 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00800 549 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00800 549 PRINTS E-class P450 group I signature 334 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00800 549 PRINTS E-class P450 group I signature 477 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00800 549 PRINTS E-class P450 group I signature 112 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00800 549 PRINTS E-class P450 group I signature 354 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00800 549 PRINTS E-class P450 group I signature 439 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00800 549 FunFam Cytochrome P450 82C4 48 539 - -
Seca10g00800 549 CDD CYP82 92 541 - -
Seca10g00800 549 PRINTS P450 superfamily signature 487 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00800 549 PRINTS P450 superfamily signature 345 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00800 549 PRINTS P450 superfamily signature 478 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00800 549 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00800 549 Pfam Cytochrome P450 59 527 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00800 Seca-Chr10 7631605 7634130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00800 58 547 Cytochrome P450 AT4G31940 53.722 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00800 - - gmx:606549 887.1