Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00796 ATGGAAAGACAGAAAACTTTGCTGCAGGAACTGATGTCCGTTGTTAAGGATATGTTACACAACACAGAGGTTGCTGTTCGTTCCTTTATGATGCTACGTCCACGGTTCCTTCATCCCAGTGGGGGTGCATCAAGTGCCACAGCCCCGTCACAGACTCCTGGAGCGACTACAACTCCTAGTTCAAGTAGCCAACCAACAAGTACATCTATAGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAAGAAACCATCACCCTTTTTACAGCAAACAGTTTTAAGATTTGAGAAGTATCTTGGTGAATGCCATCAGTGGATTGAAGAGTTGGAGCAGCTTCTTCTCTTAGATTCTGAGAGAAACACTTCTAGTACTGGATCCTCATTATTGCAATCTCTTCCCAAAGTCATGACAAATGTGCATGACTTTTTTGTTCATGTGGCTGCAAAGGTGGAGAGCATTCACCAGTATATTGAATCCATGAAATCACCATACCTAGCTAATCAGCGCCGCCGGGGGGAGGTGAATGATCCATTTTTAGAGGCTGATCGGCGAGAAACTGCAAGACAAGAAGCTGCCTCAAAAAGAGTTCATCCAACATTGCATTTACCTGCAAATTCACAACCCTCGACTCAAGTTGCTGGTTTGTTTTCCAGTTCAGGAACTCAAGGGGCATTAACTGCCCCACAGACATCTGCGCCAACTTCATCTTCGTCATCAGGAAGTGGTTTCTCTCTTTTTAGCACACCGTCTTCTGCTCCATCATCTTCTTTGTTTACAACACCAGCGACTCCTGCTCCAGGATCCTCTTGGTTTGCATCATCTAGTGCTACACCTCAAACCTCAGTTTTTGGTTCTACACCATCATCCTTGCCTGGCGTTGCATCAACTCCCTCTCTGTTCAGTAATACTGCTTCATTGTTCAGTTCAACTCCAGCTGCAGGTTCACTCTTTTCAACTCCATTTGCTTCAGGTGCAGCAACAGGATCAGGGGCAAGCTTCGGGCCTGGATCGAAAAATCCACGGCCAAAATCCAGAACTGCTCGCCGCTAA 1050 0.4581 MERQKTLLQELMSVVKDMLHNTEVAVRSFMMLRPRFLHPSGGASSATAPSQTPGATTTPSSSSQPTSTSIVPVFDFYSGLPKKPSPFLQQTVLRFEKYLGECHQWIEELEQLLLLDSERNTSSTGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSPYLANQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGALTAPQTSAPTSSSSSGSGFSLFSTPSSAPSSSLFTTPATPAPGSSWFASSSATPQTSVFGSTPSSLPGVASTPSLFSNTASLFSSTPAAGSLFSTPFASGAATGSGASFGPGSKNPRPKSRTARR. 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00796 349 Gene3D - 83 173 - -
Seca10g00796 349 MobiDBLite consensus disorder prediction 175 245 - -
Seca10g00796 349 MobiDBLite consensus disorder prediction 40 67 - -
Seca10g00796 349 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 1 335 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Seca10g00796 349 MobiDBLite consensus disorder prediction 267 289 - -
Seca10g00796 349 MobiDBLite consensus disorder prediction 175 195 - -
Seca10g00796 349 MobiDBLite consensus disorder prediction 43 67 - -
Seca10g00796 349 MobiDBLite consensus disorder prediction 318 349 - -
Seca10g00796 349 MobiDBLite consensus disorder prediction 200 245 - -
Seca10g00796 349 MobiDBLite consensus disorder prediction 318 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00796 Seca-Chr10 7608205 7611063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00796 1 349 NAC Transcription Factor Family AT4G37130 61.905 1.72e-135 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00796 K14307 - gmx:100776992 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g00796 10 7608205 7611063 Seca10g00796 10 7608205 7611063 ECH