Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00778 ATGGAGTGTATCAGTATCCCCAATAAGCATGCTTTTGTTTTTATGATTTGGCTTGTGTTCCTTAGTCCTCTAGTATGCTGTCAACTTTATTATAATTTCTATGACTCAACTTGTCCAAACCTGACCGGAATTGTTCGATACAACGTTTGGTCAGCTATGGCCAATGATACAAGAATTGCTGCTTCCCTCTTGCGCCTTCATTTCCATGATTGTTTCGTCAATGGATGTGATGGGTCTGTGCTACTAGATGATACGGACACTCTAAAGGGAGAGAAAAATGCACTGCCTAATAAAAATTCAATCAGAGGATTTGAGGTCATTGACAGAATCAAGTCTGCTTTAGAGAAGGCCTGTCCATCCACAGTGTCATGTGCTGACATACTTACTCTGGCAGCTAGAGAAGCTGTTTATCTTAGTAAAGGACCATTTTGGTCTGTGCCTCTTGGTCGTAGAGATGGCACAACTGCAAGTGAGAGCGAGGCAAATAACTTGCCATCACCCTTTGAACCTCTAGAAAACATTACTGCCAAGTTTGTTGCCAAGGGTCTTGAAAAGAAGGATGTAGCAGTGCTCTCAGGTGCCCACACCTTTGGCTTTGCTCAATGTTTTACCTTCAAGCCAAGGCTCTTCAACTTTGATGGCAGTGGTAAATCTGATCCAGCACTTGATGCTTCGCTTCTACAAAATTTACAGAAACTATGCCCAAATCAAGCTGATTCTGACAGCAATTTGGCTCCCTTGGATCCGGTCACTACCAACACATTTGATAACATGTATTACAAAAATGTTGTGAACAATTCGGGGCTACTTCAATCAGACCAGGCTCTTTTGGGTGACAACACAACTGCTTCATTGGTAACCAACTATAGCAAGTGGCCTATTCTGTTTTTCAGAGACTTTGCGGTATCTATGGAGAAAATGGGTCGCATAGGTGTACTTACAGGACAACAGGGGCAAATAAGGAGAAACTGTAGGGCAGTGAACTAG 987 0.4265 MECISIPNKHAFVFMIWLVFLSPLVCCQLYYNFYDSTCPNLTGIVRYNVWSAMANDTRIAASLLRLHFHDCFVNGCDGSVLLDDTDTLKGEKNALPNKNSIRGFEVIDRIKSALEKACPSTVSCADILTLAAREAVYLSKGPFWSVPLGRRDGTTASESEANNLPSPFEPLENITAKFVAKGLEKKDVAVLSGAHTFGFAQCFTFKPRLFNFDGSGKSDPALDASLLQNLQKLCPNQADSDSNLAPLDPVTTNTFDNMYYKNVVNNSGLLQSDQALLGDNTTASLVTNYSKWPILFFRDFAVSMEKMGRIGVLTGQQGQIRRNCRAVN. 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00778 328 SUPERFAMILY Heme-dependent peroxidases 28 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca10g00778 328 CDD secretory_peroxidase 28 327 IPR033905 GO:0004601|GO:0042744
Seca10g00778 328 Gene3D - 32 328 - -
Seca10g00778 328 FunFam Peroxidase 32 181 - -
Seca10g00778 328 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00778 328 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00778 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00778 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00778 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00778 328 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00778 328 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00778 328 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00778 328 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00778 328 ProSiteProfiles Plant heme peroxidase family profile. 28 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g00778 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Seca10g00778 328 PANTHER PEROXIDASE 72-RELATED 27 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00778 328 Gene3D Peroxidase, domain 2 165 307 - -
Seca10g00778 328 Pfam Peroxidase 46 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g00778 328 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Seca10g00778 328 FunFam Peroxidase 165 307 - -
Seca10g00778 328 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g00778 328 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g00778 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g00778 328 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g00778 328 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00778 Seca-Chr10 7390633 7393181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00778 29 324 Peroxidase AT1G49570 66.221 2.23e-138 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00778 K00430 - gmx:100815708 579.711