Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00744 ATGCCCGATCATCCCACTCCCACAAACATGAACGACCAGCTCTCCAACCCCACCTCCATCTTCGGCCTCCGCTTGTGGGTTGTCCTCGGCGTTTGTGTCGGTGCTGCCATCGTCCTCCTTCTCTTCCTCATCTCTATCTGGCTCGCTTTCAAGCGTTCCAAGACCAAACATTCCATTCCTGATGTCTCTAAGGAGATCCAAGAGATCAGAGTAGACCATTCCAACAACCCTCCCCTTCAACCCGACCCACTTCCTGAACCCGACCCGCTTTCAGGTAACGAGCTCCAGCTTCCGCTGGAAGATGACAATTCATTGGGTCTGGGCTACAATAGAATTCAGTTTGAGATTGGGAAGAACCATAGGATTTCGTACCCTGAACGTGCCTGTGTTAGGTCTTCTTCCCATGAAGGCAGTGGAGAGGCTCGACCCATGGATCAGGTGCCAACGGTGATTCCTCAAGTTTCTCACTTGGGTTGGGGACATTGGTATACTCTCAGGGAGCTTGAGGATGCAACCAATGGGTTCGCCCCAGAAAATGTTATTGGCGAAGGCGGTTATGGAATCGTTTATCATGGTATCTTGGAGGACAACACTAATATTGCAATTAAGAATTTGCTCAATAATAGGGGACAAGCTGAGAGAGAGTTTAAGGTTGAAGTGGAAGCTATAGGACGAGTTCGCCACAAGAATTTAGTGAGGTTGCTTGGTTATTGTGCTGAAGGAGCTCATAGAATGCTTGTGTATGAGTACGTTGACAATGGTAACTTGGAGCAATGGCTACATGGGGATGTTGGGCCTTGCAGTCCTCTAACTTGGGAAATTCGAATGAACATTATTCTGGGAACTGCAAAAGGGTTAACTTATCTTCACGAGGGGCTGGAACCAAAAGTTGTACACCGTGATATTAAATCAAGCAACATTTTGCTTAGTAAGCAGTGGCATTCAAAGGTGTCAGATTTTGGCCTTGCCAAACTCCTTGGCCCTGAGAGCAGCTATATCACAACCCGTGTAATGGGTACATTTGGGTTTGTACATTCTCCTTTGTCTGTTGCCCCATTTACTCCAGGAAGTATTATAGATGATTAG 1086 0.4715 MPDHPTPTNMNDQLSNPTSIFGLRLWVVLGVCVGAAIVLLLFLISIWLAFKRSKTKHSIPDVSKEIQEIRVDHSNNPPLQPDPLPEPDPLSGNELQLPLEDDNSLGLGYNRIQFEIGKNHRISYPERACVRSSSHEGSGEARPMDQVPTVIPQVSHLGWGHWYTLRELEDATNGFAPENVIGEGGYGIVYHGILEDNTNIAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLSKQWHSKVSDFGLAKLLGPESSYITTRVMGTFGFVHSPLSVAPFTPGSIIDD. 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00744 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 297 309 IPR008271 GO:0004672|GO:0006468
Seca10g00744 361 SMART serkin_6 175 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00744 361 Pfam Protein kinase domain 178 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00744 361 ProSitePatterns Protein kinases ATP-binding region signature. 181 203 IPR017441 GO:0005524
Seca10g00744 361 FunFam Os07g0541700 protein 251 340 - -
Seca10g00744 361 ProSiteProfiles Protein kinase domain profile. 175 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00744 361 MobiDBLite consensus disorder prediction 72 97 - -
Seca10g00744 361 Gene3D Phosphorylase Kinase; domain 1 151 250 - -
Seca10g00744 361 Gene3D Transferase(Phosphotransferase) domain 1 251 350 - -
Seca10g00744 361 PANTHER OS01G0323000 PROTEIN 9 345 - -
Seca10g00744 361 FunFam Probable serine/threonine-protein kinase At1g01540 155 250 - -
Seca10g00744 361 SUPERFAMILY Protein kinase-like (PK-like) 150 343 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00744 Seca-Chr10 7010606 7014224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00744 151 342 Trihelix Transcription Factor Family AT1G23540 50.259 9.40e-61 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Seca10g00744 Pkinase 4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00744 - - gmx:100797726 552.747