Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g00736 | ATGGAAGATCTGGAGAACGAACTGAGCTTTATGGATGGATTGACAGAAGAGCAAATTATGAGCCATATTGGACAAGAAGTTGCCCAATCTGCTCCTGAGAATCAAGATACATCTGAAAATGAGATTTGTACAATATGTCAGGAGGAGTATGTGAATGGAGAACAACTTGGGAGACTGGATTGTGGGCACAAATATCACCTTGCTTGCATCAAACAATGGTTGGTGTTGAGGAACAACTGCCCTATTTGCAAACAAACGGCTCTGGCTGTTGAAAGTGATGATGAATGA | 288 | 0.4167 | MEDLENELSFMDGLTEEQIMSHIGQEVAQSAPENQDTSENEICTICQEEYVNGEQLGRLDCGHKYHLACIKQWLVLRNNCPICKQTALAVESDDE. | 96 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g00736 | 95 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 12 | 88 | IPR045191 | GO:0061630 | |
Seca10g00736 | 95 | Pfam | Ring finger domain | 42 | 84 | IPR001841 | - | |
Seca10g00736 | 95 | ProSiteProfiles | Zinc finger RING-type profile. | 43 | 84 | IPR001841 | - | |
Seca10g00736 | 95 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 21 | 89 | IPR013083 | - | |
Seca10g00736 | 95 | SMART | ring_2 | 43 | 83 | IPR001841 | - | |
Seca10g00736 | 95 | SUPERFAMILY | RING/U-box | 29 | 88 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g00736 | Seca-Chr10 | 6930271 | 6930804 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g00736 | 13 | 88 | C3H Transcription Factor Family | AT2G15530 | 50.000 | 2.86e-21 | 84.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g00736 | - | K22753 | cam:101502092 | 112.079 |