Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00722 ATGGCCGTGGAGCTTATGATGGGCTACAGGAATGACAATTTTGCGGCCAATTTCGAAGAAAATGCTGTTCAAGAAGCTGCCTCTGGGTTAGAGAGCGTGGAGAAGCTCATCAGGTTGCTATCACAGACTCAGCAACAACACAAGTCATCTCCAAAGTCTTCCATGGAAATTGAGTTGGACTATAAAGCTGTTGCTGACGTCGCTGTTTCAAAGTTCAAGAAGGTGATTTCACTTCTGGGTAGAACCAGAACCGGTCATGCTCGATTCAGAAGAGCCCCTTTAGCTCCTCCCTCTTCTTCCGTTAACCAAAACCTTGAAACACCTTGTGAACCCAGAGTCTATCATGCTACTCCGTTGCAGCAGATCCCACCACCAACCCTTCAAACACACAGTGAACATAATCACCCTTTGATCCCAAACAGAAAGGACTCCTCAAAGACCATTACTTTCTCCTATTCCTCTGCTGCCAATTCGTTCATGTCATCCCTCACCGGCGACGCTGACACCAAACACCCTGGTTCATCCTCGCCGGCGACGCCTTTTCAGATCACGAATCTCTCTCAGGTCTCCTCGTCAGGAAAGCCTCCTCTTTCTTCGTGTTCTTTGAAGAGAAAGTGTAGCTCTGAGAACTTGGGTTCTGCCAAGTGCGGCAGTTCCTCCAGTCGCTGCCATTGTTCAAAGAAGAGAAAAATGAGGTTGAAGAGAGTGGTGAGGGTACCAGCAATAAGCTTGAAGATGGCTGATATTCCACCTGATGATTACTCTTGGAGGAAATACGGACAGAAACCTATTAAAGGATCCCCTCATCCAAGGGGTTATTACAAGTGTAGCAGCGTGAGAGGGTGTCCAGCGCGGAAACACGTAGAGAGAGCTGTGGATGATCCATCTATGTTGGTAGTGACCTATGCCAGTTGGAATTATGAAGGTGAGTGA 933 0.477 MAVELMMGYRNDNFAANFEENAVQEAASGLESVEKLIRLLSQTQQQHKSSPKSSMEIELDYKAVADVAVSKFKKVISLLGRTRTGHARFRRAPLAPPSSSVNQNLETPCEPRVYHATPLQQIPPPTLQTHSEHNHPLIPNRKDSSKTITFSYSSAANSFMSSLTGDADTKHPGSSSPATPFQITNLSQVSSSGKPPLSSCSLKRKCSSENLGSAKCGSSSSRCHCSKKRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAVDDPSMLVVTYASWNYEGE. 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00722 310 SMART WRKY_cls 250 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca10g00722 310 Pfam WRKY DNA -binding domain 252 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca10g00722 310 FunFam WRKY transcription factor 65 234 308 - -
Seca10g00722 310 Pfam Plant zinc cluster domain 203 248 IPR018872 -
Seca10g00722 310 ProSiteProfiles WRKY domain profile. 245 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca10g00722 310 SUPERFAMILY WRKY DNA-binding domain 247 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca10g00722 310 Gene3D WRKY domain 229 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca10g00722 310 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 23 303 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00722 Seca-Chr10 6747597 6749058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00722 19 310 WRKY Transcription Factor Family AT2G24570 45.981 1.05e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca10g00722 WRKY 9.6e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00722 - - gmx:100804089 420.624