Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00718 ATGGAACCAGCAGCTGCGGACTCCTCATCTCAACCTACTCCTCCAGCTTCTAATACCGAACATCACTCCACCAAAGTAACTTCGCCAATTGGGAATGCACATGATTCACCATCGTTGTCACCCACTGCTGGCATACCGTCCTGGGCAAGAAATCTGAAACTCCCACAGTCCCTTGGGCTTGGGGCAGCACAACAGGACTCACAAACTGAAACTAATGGCATGTCAGCTTTTGCCCGCTTGACTAGTGGACTTGGATTACGAGTGCCCTCAAATGAGACTTCTCCAACCAATGCAGGAGCTGAGCAACCTAATTTAATTGAATCATTCACCAAAGGGTTGATGGACTCTTCCAAGAGTGCAGTAAAGGCTGTGCAGACCAAAGCACGCCATATTGTCTCTCAAAATAAACGAAGATACCAGGAAGGTGGATTTGATTTGGATATGGCATACATCACTGAAAATATAATTGCTATGGGATTTCCGGGTGGTGATTTTAGCTCTGGAATTTTCGGATACATTGAGGGTTTCTATCGCAATCACATGGAAGAAGTAATCAAGTTTTTTGAAACTCATCATAAGGTACCAAAATATCTATTTTAA 600 0.44 MEPAAADSSSQPTPPASNTEHHSTKVTSPIGNAHDSPSLSPTAGIPSWARNLKLPQSLGLGAAQQDSQTETNGMSAFARLTSGLGLRVPSNETSPTNAGAEQPNLIESFTKGLMDSSKSAVKAVQTKARHIVSQNKRRYQEGGFDLDMAYITENIIAMGFPGGDFSSGIFGYIEGFYRNHMEEVIKFFETHHKVPKYLF. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00718 199 MobiDBLite consensus disorder prediction 1 45 - -
Seca10g00718 199 MobiDBLite consensus disorder prediction 1 46 - -
Seca10g00718 199 Gene3D Protein tyrosine phosphatase superfamily 122 199 IPR029021 -
Seca10g00718 199 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 115 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00718 Seca-Chr10 6718535 6721229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00718 43 193 Protein tyrosine phosphatase (PTP) family AT3G19420 61.146 1.39e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00718 K01110 - gmx:100801622 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g00718 10 6718535 6721229 Seca10g00718 10 6718535 6721229 ECH
Seca10g00718 10 6718535 6721229 Seca8g07765 8 174908508 174914869 PCT