Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00715 ATGGCTCAACCCCAACAACGCTCTCCCTCACTCCTCTGTGATGAAGAACAACTCACTTTTGAGGAGGAAGATTCTGGAGAGAGTGACCCCCATGTCTCAAAGCCCCCAACTTTACCTATAACATTGCTCGAGGAGGGACACGATGACCTCCTCTCTCTAATCTCCAAAGAGAAAAGCACCCATTTCTATTTCACTACCAATGGGACTCTAACTCTTCTTGGGGGTACTCACAACGACGCCGTGCGCTGGATTTCTAGAGTTTCTGCCTTCTATGGTTTCTCTGCTTCAACAACTGTTCTTGCCGTCAACTACTTTGGTAGGTTCGTAACAAGCCTAAGCTTTCAATGGGATAAGCCATGGGTGACTCAGCTCACTGCAGTTGCTTGTGTTTCTCTTGCTGCCAAAATGGAGGAGACCCATGTCCCACTTCTTTTGGAGCTGCAAGTGGCAGAATCAGAGTTCTTGTTTCAACCAAAGACCATACAGAGGATGGAGCTCCTCGTGTTGTCCACTCTTGAGTGGAGGATGAACCCTGTGACCCCAATTTCCTTCTTTCACCACTGTGTCAGAAGGCTTGGTTTAAAGAGTCCCTTGCATTGGGAGTTTCTGAGTAGTTGTGAACAAGTTCTTCTCTGTGTCATTGCGGCAGATTCAAAGGTTATGAGTTATCTTCCTTCTACACTGGCTGCTGCTATAATGATCCATGTCATTAAAGAGATTGAACAATTTAATACACCGGAATACAAAAATCAGCTTGCAAATTTACTCAGAGTTTGTGAGGAAGAAGTGAATGGATGCTACAAATTCATGGTGAAACGATTAGTTTGTGATGAAGGCGTTCGCAATCTTGGCCAAAAACGCAAACGCCTATCTGAACCAAGTAGCCCTGGTGGGGTCATTGATGCATGTTTCAGCTGTGAAAGCTCAAATTCAAATGAGTCATCACTTTCACTGGAGGAGCTAGTGTCTGAGAGGGCTTCTCGTGATGATCTAAATAGTCCTCGTTAA 1008 0.4514 MAQPQQRSPSLLCDEEQLTFEEEDSGESDPHVSKPPTLPITLLEEGHDDLLSLISKEKSTHFYFTTNGTLTLLGGTHNDAVRWISRVSAFYGFSASTTVLAVNYFGRFVTSLSFQWDKPWVTQLTAVACVSLAAKMEETHVPLLLELQVAESEFLFQPKTIQRMELLVLSTLEWRMNPVTPISFFHHCVRRLGLKSPLHWEFLSSCEQVLLCVIAADSKVMSYLPSTLAAAIMIHVIKEIEQFNTPEYKNQLANLLRVCEEEVNGCYKFMVKRLVCDEGVRNLGQKRKRLSEPSSPGGVIDACFSCESSNSNESSLSLEELVSERASRDDLNSPR. 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00715 335 CDD CYCLIN_AtCycD-like_rpt1 78 174 - -
Seca10g00715 335 SMART Cyclin_C_2 179 307 IPR004367 -
Seca10g00715 335 Gene3D - 178 268 - -
Seca10g00715 335 FunFam CYCLIN D32 178 268 - -
Seca10g00715 335 Pfam Cyclin, N-terminal domain 76 177 IPR006671 -
Seca10g00715 335 FunFam D6-type cyclin 61 177 - -
Seca10g00715 335 CDD CYCLIN_AtCycD-like_rpt2 179 270 - -
Seca10g00715 335 SUPERFAMILY Cyclin-like 161 275 IPR036915 -
Seca10g00715 335 SMART cyclin_7 82 170 IPR013763 -
Seca10g00715 335 MobiDBLite consensus disorder prediction 1 38 - -
Seca10g00715 335 MobiDBLite consensus disorder prediction 309 335 - -
Seca10g00715 335 Gene3D - 78 177 - -
Seca10g00715 335 PANTHER CYCLINS 53 272 IPR039361 -
Seca10g00715 335 SUPERFAMILY Cyclin-like 45 177 IPR036915 -
Seca10g00715 335 Pfam Cyclin, C-terminal domain 179 281 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00715 Seca-Chr10 6682348 6683992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00715 27 312 Core Cell Cycle Gene Families AT5G67260 47.569 7.64e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00715 K14505 - gmx:100785030 350.517