Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00675 ATGCCCCCTCCTCCCCATTTTTTTCCACTTAAGCCATCATTTCACTCCCACCCTGCATTTCATAGTCCTCTTCCTTTGCAGAAACAGAAAATGGCTCAGCTTAATCTTGTACTTGTCTGGTTACTCTTCTTAAACTTGTGCCTTTATTCATGTCCTATTTCGGCCCAGCTAAGTAGACACCACTACGCAAATTCCTGCCCCAATGTTGAAAACATTGTCAGAGAAGCAGTTAAAAAGAAATTTCATCAAACTTTTGTCACAGTTCCTGCTACTCTACGTCTCTTCTTCCATGATTGCTTTGTCCAGGGTTGTGATGCTTCTGTTCTGGTAGCATCGACGCGAAACAACAAAGCAGAGAAGGATCACCCTGACAATCTTTCATTGGCTGGAGATGGATTTGACACAGTGATCAAAGCAAAAGAAGCGGTGGATGCTGTACCACTTTGTAGAAATAAAGTCTCATGCGCTGATATTCTTGCAATGGCAACCAGGGATGTTATTTCACTGGCTGGTGGACCTTACTATGAGGTTGAATTGGGAAGATTTGATGGGCTAAGATCTAAAGCATCAGATGTAGAGGGGAGGCTCCCTCAACCGGGCTTCAACTTGAACCAGCTTAATTCCCTGTTTGCGGCAAACGGGCTTACCCAAACAGAAATGATTGCTCTCTCAGGTACTACTAATACGCGTGCTTAA 696 0.4397 MPPPPHFFPLKPSFHSHPAFHSPLPLQKQKMAQLNLVLVWLLFLNLCLYSCPISAQLSRHHYANSCPNVENIVREAVKKKFHQTFVTVPATLRLFFHDCFVQGCDASVLVASTRNNKAEKDHPDNLSLAGDGFDTVIKAKEAVDAVPLCRNKVSCADILAMATRDVISLAGGPYYEVELGRFDGLRSKASDVEGRLPQPGFNLNQLNSLFAANGLTQTEMIALSGTTNTRA. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00675 231 ProSiteProfiles Plant heme peroxidase family profile. 56 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g00675 231 Gene3D - 61 197 - -
Seca10g00675 231 PRINTS Plant peroxidase signature 218 230 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00675 231 PRINTS Plant peroxidase signature 152 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00675 231 PRINTS Plant peroxidase signature 171 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00675 231 PRINTS Plant peroxidase signature 90 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00675 231 PRINTS Plant peroxidase signature 131 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00675 231 PRINTS Plant peroxidase signature 66 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00675 231 ProSitePatterns Peroxidases active site signature. 88 99 IPR019794 GO:0004601
Seca10g00675 231 Gene3D Peroxidase, domain 2 198 226 - -
Seca10g00675 231 SUPERFAMILY Heme-dependent peroxidases 56 225 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca10g00675 231 PRINTS Haem peroxidase superfamily signature 171 183 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g00675 231 PRINTS Haem peroxidase superfamily signature 88 102 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g00675 231 PRINTS Haem peroxidase superfamily signature 153 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g00675 231 PRINTS Haem peroxidase superfamily signature 219 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g00675 231 PANTHER - 38 226 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00675 231 FunFam Peroxidase 60 206 - -
Seca10g00675 231 Pfam Peroxidase 73 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00675 Seca-Chr10 6261952 6265176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00675 54 225 Peroxidase AT4G37530 76.163 1.34e-93 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00675 K00430 - gmx:100804350 355.91