Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00662 ATGGGTGAGGAGTCACCAATGATGGTTGTGAGAGAATTCGACCCAAATAAAGACAGGGAGAGAGTAGAAGCAGTTGAAAGGACATGTGAGGTTGGACCCAGTGACAAGCTCTCCCTCTTCACCGACATGCTCGGTGACCCAATTTGCAGGGTCCGCCACTCACCTGCTTTCCTCATGCTGGTGGCGGAGATAGGTGAAGAGATAGTAGGAATGATAAGAGGTTGTATAAAAATCGTCACATGCGGTAAGAAGCTCTCTAGGAATGGAAAGCACAACAATACTGACAATGACAAGCATGTCCCAGTATACACTAAAGTCGCTTACATATTAGGCCTTCGTGTTTCTCCTAATCAACGGAGAATGGGAATAGGGTTGAAGCTTGTGCAGAGAATGGAGGAATGGTTCAGGGATCATGGCGCTGAATACTCCTATATGGCAACTGAAAACGACAATTTAGCGTCCGTTAAACTCTTCACCGACAAATGCGGGTATTCAAAGTTCCGTACTCCCTCCGTCCTTGTCAACCCCGTTTTCGCCCATAGGCTCAGGGTCTCTCCAAAGGTCACAATCATTCAACTCACTCCCTCCGACGCCGAAACACTCTACCGTCGTCGATTCGCCACCACTGAGTTCTTCCCACGCGACATTGATTCTGTCCTTAATAACAAACTCAGCCTCGGCACCTTCCTAGCCGTTCCAAGTGGGTCCTACACTGCCGAGACATGGCCCGGCCCGGATCGTTTCCTCTCGGGCCCACCAAACTCGTGGGCCGTCCTCAGCGTCTGGAACTCCAAGGAGGTGTTCACGCTCGAGGTTCGTGGCGCTTCGCGCGTGAAGCAAACGCTCGCCAAGACGACGCGGGTTGTGGACCGGGCCTTGCCGTGGCTTCGGTTGCCGTCGGTTCCTGATATATTCAGGCCGTTCGGGTTTCACTTCTTGTACGGGCTTGGAGGAGAAGGCCCAGAGGCCGCTAAGATGGTAAAGGCCCTGTGTGGGTTCGCGCATAACCTGGCCATGGAACAAGGGTGTGGAGTGGTGGCCACGGAAGTTGCAGCCAGTGAGCCTCTGAGGATTGGGATACCCCACTGGAAGATGCTGTCTTGTGAAGAAGATTTATGGTGCATCAAGAGGCTTGATGAAGATTATAGCGATGGTTCCGTCGGTGACTGGACCAAATCTCAACCTGGAATCTCCATTTTTGTTGACCCCAGAGAGATCTAA 1221 0.5201 MGEESPMMVVREFDPNKDRERVEAVERTCEVGPSDKLSLFTDMLGDPICRVRHSPAFLMLVAEIGEEIVGMIRGCIKIVTCGKKLSRNGKHNNTDNDKHVPVYTKVAYILGLRVSPNQRRMGIGLKLVQRMEEWFRDHGAEYSYMATENDNLASVKLFTDKCGYSKFRTPSVLVNPVFAHRLRVSPKVTIIQLTPSDAETLYRRRFATTEFFPRDIDSVLNNKLSLGTFLAVPSGSYTAETWPGPDRFLSGPPNSWAVLSVWNSKEVFTLEVRGASRVKQTLAKTTRVVDRALPWLRLPSVPDIFRPFGFHFLYGLGGEGPEAAKMVKALCGFAHNLAMEQGCGVVATEVAASEPLRIGIPHWKMLSCEEDLWCIKRLDEDYSDGSVGDWTKSQPGISIFVDPREI. 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00662 406 FunFam Probable N-acetyltransferase HLS1-like 17 171 - -
Seca10g00662 406 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 6 166 IPR016181 -
Seca10g00662 406 CDD NAT_SF 59 142 - -
Seca10g00662 406 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 183 IPR000182 GO:0016747
Seca10g00662 406 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 406 - -
Seca10g00662 406 Gene3D - 7 173 - -
Seca10g00662 406 Pfam Acetyltransferase (GNAT) family 53 164 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00662 Seca-Chr10 6101662 6103921 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca10g00662 Acetyltransf_1 1.5e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00662 - - gmx:100800613 716.842