Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00656 ATGAAAGTTCGTTACTTGGTCTTCTACATCATCATCATCTCACTGTCTTTGTCCATCCCAGTCAAAGGCGTCAACACCACAATTCAATTCCGCACTACAAATGAATCTATCCCAAGAAGAATTCTCCACCAGCCACTCTTTCCGGCGAGTTCTGCTCCACCGCCAGCAGCCACAGAGTCACCACCGCCACCTCCACCTCAGACGGAGACTCCACCTTCTTCCGATGGCAACATTCCTTTCTTTCACGAGTATCCAGCGGGGCCACCTCCAGATCAGAACCAGGCAGCACCTTCAACTTTAGCGTCCAACAGCACAACCGCGAACCCAACGGCGACACAGCCAACAAAGGGGACAAAGAAGGTGGCCATTGTGATCTCCGTCGGAATTGTGACGCTCGGAATGCTTTCAGCACTCGCCTTCTTCTTATACAAACACAGAGCGAAACACCCCATGGAGACCCAAAAGCTTGTGGGTGGGAATCCACAGAGGAACAACCCAGAGGATTCAACAGCACCACCGTCAAGCTTCCTCTACATTGGTACCGTGGAACCTACGCGAACTTCAGCGACAGTGAATGAACCGAGAGAATCCAATAAGGCAAATAGGTCACCTTATCATAAACTCAATTCTATGAAGCGATCATCCGATCGGTACCGTCCGAGTCCTGAGTTGCAGCCATTGCCGCCGCTGAGTAAGCCTCTCGACGGAAACTACCCGCCGGCGGTGTCATCGTCGTCTTCTTCTTCCGACGAGGAAAGCCAGGAGATGGCGTTTCATTCGCCGCAAAACTCGTCACTGAGTCACGAAGAAGCGTATTACACGCCGGTTTCGCGTCAGAGTTCTCTGGTTAACGGTAGCCCCACCGTGCCGCCTTCTAAGAGAGAGACTCCTTCGACCCCTCCTTCGCTTCCATTCTCCAAAAGAACTTCCCCAAAGTCTCGCATTTCCGCTTCATCGCCGGATATAAGACACGTCATCATACCGTCTATAAAGCAGGCTCCGCCGGCGCCGCCGCATGAGCAGCCGGATAAACAAAAGAGCTCCGGAACTTCCAGAAGACCGAAATTCTCAGCGCCACCTCCAGCTCCGAATTTGACGCATCTTCAGTCAACAACTGAAATGGCTTTGAAGGTGTCTAGGACTTCACTCAATCCTCCTCCTCCGCCGCCACCACCGCCTCCTCCTCCTCCACCGCGGCGAAAAACACCGCGGAAAGAAGGGTCTCCTTCGGTTGGTGTTTCTTCTTCTTCTGCATCTTTAAAGCAGCAGTCTTGGTCTCCGAGTCAAAGAGGTGCTGCTTCTGCTGGCAGTGTAACAAAAGGTTCAGTTTCAGAGCATGGTGATAAAAGTGTGAGCTCTTCCGAGAGGCTTGAAGCCAATGACACGGATGGAGCCAAACCCAAGTTAAAGGCTCTGCATTGGGATAAAGTCCGTGCAACCTCAGACCGTGCTACAGTGTGGGACCAGCTAAAATCAAGCTCGTTTCAATTAAATGAGGACATGATGGAGTCCCTGTTTGGCTGCAAAGCCACGAATTCTGCCCCAAAAGAACCTCCTAAAAAATCAGTTTTCCCTTCAGTTGATCAGGAGAACAGGGTGTTAGACCCAAAGAAGTCCCAGAATATAGCTATACTACTAAGGGCACTGAATGTGACAAGAGATGAGGTGTCCGAGGCTCTTTTGGATGGGAATCCTGAAGGTTTGGGTGCTGAGCTATTGGAAACTCTTGTAAAGATGGCTCCTACTAAAGAGGAAGAGATCAAACTTAAAAACTATGATGGTGATCTCTCAAAACTTGGATCTGCAGAAAGATTTCTTAAAACAGTGCTTGATATCCCTTTTGCCTTTAAAAGAGTTGAAGCTATGCTATACAGGGCCAACTTTGATTCAGAAGTTAACTACCTCAGGAAGTCTTTTCAAACCCTGGAGGCGGCAAGTGAAGAATTGAGGAACAGTCGGTTATTCTTCAAACTCCTTGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGATGGCACTAATCGAGGTGATGCTAAAGCTTTCAAATTGGACACACTCCTGAAACTTGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTCCACTTTGTGGTCCAAGAGATCATCAGATCTGAAGGTGCAGGAGCCGAATCTGCCAATGAGAATGCTCAGAATCAAATGGATTCCAAATTTAATGAGGATGAGTTTAGGAAGAAAGGATTGCAGGTTGTGGCAGGGCTCAGTAGAGACCTTATTAATGTCAAAAAAGCAGCAGGAATGGATTCGGATGTCTTAAGCAGCTATGTTTCAAAGCTTGAAACGGGGCTTGATAAAGTGCGGTTGGTTTTGGAATATGAAAGGCCAGATATGCCAGGCAATTTCTTTAACTCCACAAAACTGTTTCTGAAATATGCTGAAGATGAAATTGTGAGGATTAAGGCTGATGAGAAAAAAGCCTTATTCCTTGTGAAAGAAGTTACGGAATACTTTCATGGGAATGCAGCAAAGGAAGAAGCCCACCCTTTCAGGATTTTTATGATTGTAAGAGACTTTCTAAATATTTTGGATCTAGTGTGCAAAGAAGTGGGAAGGATGCATGATAGAATTGTTGGAGGTTCTTCCAGATCCTTCCGAATAGCTCCTAATGCATCATTGCCTGTTCTCAACAGGTACAATGCAAGACAAGATAGGAGCTCAGATGAGGACAGCTCATCCCCATAG 2724 0.4736 MKVRYLVFYIIIISLSLSIPVKGVNTTIQFRTTNESIPRRILHQPLFPASSAPPPAATESPPPPPPQTETPPSSDGNIPFFHEYPAGPPPDQNQAAPSTLASNSTTANPTATQPTKGTKKVAIVISVGIVTLGMLSALAFFLYKHRAKHPMETQKLVGGNPQRNNPEDSTAPPSSFLYIGTVEPTRTSATVNEPRESNKANRSPYHKLNSMKRSSDRYRPSPELQPLPPLSKPLDGNYPPAVSSSSSSSDEESQEMAFHSPQNSSLSHEEAYYTPVSRQSSLVNGSPTVPPSKRETPSTPPSLPFSKRTSPKSRISASSPDIRHVIIPSIKQAPPAPPHEQPDKQKSSGTSRRPKFSAPPPAPNLTHLQSTTEMALKVSRTSLNPPPPPPPPPPPPPPRRKTPRKEGSPSVGVSSSSASLKQQSWSPSQRGAASAGSVTKGSVSEHGDKSVSSSERLEANDTDGAKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMESLFGCKATNSAPKEPPKKSVFPSVDQENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKNYDGDLSKLGSAERFLKTVLDIPFAFKRVEAMLYRANFDSEVNYLRKSFQTLEAASEELRNSRLFFKLLEAVLRTGNRMNDGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGAGAESANENAQNQMDSKFNEDEFRKKGLQVVAGLSRDLINVKKAAGMDSDVLSSYVSKLETGLDKVRLVLEYERPDMPGNFFNSTKLFLKYAEDEIVRIKADEKKALFLVKEVTEYFHGNAAKEEAHPFRIFMIVRDFLNILDLVCKEVGRMHDRIVGGSSRSFRIAPNASLPVLNRYNARQDRSSDEDSSSP. 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00656 907 MobiDBLite consensus disorder prediction 449 464 - -
Seca10g00656 907 Gene3D Formin, FH2 domain 454 867 IPR042201 -
Seca10g00656 907 MobiDBLite consensus disorder prediction 363 379 - -
Seca10g00656 907 SMART it6_source 459 871 IPR015425 -
Seca10g00656 907 MobiDBLite consensus disorder prediction 157 208 - -
Seca10g00656 907 MobiDBLite consensus disorder prediction 48 117 - -
Seca10g00656 907 MobiDBLite consensus disorder prediction 238 292 - -
Seca10g00656 907 MobiDBLite consensus disorder prediction 299 317 - -
Seca10g00656 907 Pfam Formin Homology 2 Domain 462 856 IPR015425 -
Seca10g00656 907 MobiDBLite consensus disorder prediction 48 72 - -
Seca10g00656 907 ProSiteProfiles Formin homology-2 (FH2) domain profile. 459 882 IPR015425 -
Seca10g00656 907 MobiDBLite consensus disorder prediction 408 448 - -
Seca10g00656 907 PANTHER FORMIN-RELATED 16 901 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Seca10g00656 907 SUPERFAMILY Formin homology 2 domain (FH2 domain) 387 866 - -
Seca10g00656 907 MobiDBLite consensus disorder prediction 93 117 - -
Seca10g00656 907 MobiDBLite consensus disorder prediction 155 464 - -
Seca10g00656 907 MobiDBLite consensus disorder prediction 382 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00656 Seca-Chr10 6018609 6023763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00656 39 897 FH2 protein (formin) Gene Family AT5G67470 58.857 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00656 - - gmx:100798670 1198.73