Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00654 ATGGGTAGCTCTGGCATCTCTTTTTCTTTGTCTAGCCTTATGTGTGAAGAAGGGGAAGATAGCTTCTTTGAAGATGAAGATGAAAACACTTGCATTATTAACTCACTTGATGATGATAACAACACATGTTTTGTTTTGGAGGATGAAGAGGAATACATTGAGTATTTGTTCAGTCAAGAAAGGGGATTTGGATCCCAGATTCATTTATTGTCCTGTGATGATCATTCAAACAGACACTGGTTATGGAGTGCCCGTTTGGATGCCATTGATTGGATTTTCAATACACAAGCAAAATTTGGGTTCAAAGTTCAGACAGCTTATTTATCAGTGACTTACTTTGATCGGTTTCTTTCAAAGCGATCCATAGATGAATCAAAACCTTGGGCTATTCAATTGTTATCAGTGGCATGTTTATCCCTGGCAGCAAAGATGGAAGAGCAGAGGGTGCCCCCTTTATATGAATATCCAATAGAAGAATATCGCTTTGAGAACAAAGTTATTAAGAACATGGAGCTTATGATTTTGGGTACCTTGGAATGGAAAATGGCATCACCAACTCCTTTTGCTTATTTGCATTACTTTGTTAACAAGTTCTGCCCTGGATCCTCCAGACCAGAAACAATAATCACAAAAGCAATGGAACATATTGTGGCCATGGTTAAAGGTATGTTAATTTGA 678 0.3791 MGSSGISFSLSSLMCEEGEDSFFEDEDENTCIINSLDDDNNTCFVLEDEEEYIEYLFSQERGFGSQIHLLSCDDHSNRHWLWSARLDAIDWIFNTQAKFGFKVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQRVPPLYEYPIEEYRFENKVIKNMELMILGTLEWKMASPTPFAYLHYFVNKFCPGSSRPETIITKAMEHIVAMVKGMLI. 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00654 225 SUPERFAMILY Cyclin-like 40 182 IPR036915 -
Seca10g00654 225 CDD CYCLIN_AtCycD-like_rpt1 84 180 - -
Seca10g00654 225 Gene3D - 79 183 - -
Seca10g00654 225 SMART cyclin_7 90 176 IPR013763 -
Seca10g00654 225 PANTHER CYCLINS 45 195 IPR039361 -
Seca10g00654 225 FunFam Cyclin-D5-1 80 183 - -
Seca10g00654 225 Pfam Cyclin, N-terminal domain 53 182 IPR006671 -
Seca10g00654 225 ProSitePatterns Cyclins signature. 85 116 IPR006671 -
Seca10g00654 225 Gene3D - 184 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00654 Seca-Chr10 5995276 5998123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00654 9 221 Core Cell Cycle Gene Families AT4G37630 39.450 3.00e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00654 K18811 - gmx:100798140 334.339