Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g00654 | ATGGGTAGCTCTGGCATCTCTTTTTCTTTGTCTAGCCTTATGTGTGAAGAAGGGGAAGATAGCTTCTTTGAAGATGAAGATGAAAACACTTGCATTATTAACTCACTTGATGATGATAACAACACATGTTTTGTTTTGGAGGATGAAGAGGAATACATTGAGTATTTGTTCAGTCAAGAAAGGGGATTTGGATCCCAGATTCATTTATTGTCCTGTGATGATCATTCAAACAGACACTGGTTATGGAGTGCCCGTTTGGATGCCATTGATTGGATTTTCAATACACAAGCAAAATTTGGGTTCAAAGTTCAGACAGCTTATTTATCAGTGACTTACTTTGATCGGTTTCTTTCAAAGCGATCCATAGATGAATCAAAACCTTGGGCTATTCAATTGTTATCAGTGGCATGTTTATCCCTGGCAGCAAAGATGGAAGAGCAGAGGGTGCCCCCTTTATATGAATATCCAATAGAAGAATATCGCTTTGAGAACAAAGTTATTAAGAACATGGAGCTTATGATTTTGGGTACCTTGGAATGGAAAATGGCATCACCAACTCCTTTTGCTTATTTGCATTACTTTGTTAACAAGTTCTGCCCTGGATCCTCCAGACCAGAAACAATAATCACAAAAGCAATGGAACATATTGTGGCCATGGTTAAAGGTATGTTAATTTGA | 678 | 0.3791 | MGSSGISFSLSSLMCEEGEDSFFEDEDENTCIINSLDDDNNTCFVLEDEEEYIEYLFSQERGFGSQIHLLSCDDHSNRHWLWSARLDAIDWIFNTQAKFGFKVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQRVPPLYEYPIEEYRFENKVIKNMELMILGTLEWKMASPTPFAYLHYFVNKFCPGSSRPETIITKAMEHIVAMVKGMLI. | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g00654 | 225 | SUPERFAMILY | Cyclin-like | 40 | 182 | IPR036915 | - | |
Seca10g00654 | 225 | CDD | CYCLIN_AtCycD-like_rpt1 | 84 | 180 | - | - | |
Seca10g00654 | 225 | Gene3D | - | 79 | 183 | - | - | |
Seca10g00654 | 225 | SMART | cyclin_7 | 90 | 176 | IPR013763 | - | |
Seca10g00654 | 225 | PANTHER | CYCLINS | 45 | 195 | IPR039361 | - | |
Seca10g00654 | 225 | FunFam | Cyclin-D5-1 | 80 | 183 | - | - | |
Seca10g00654 | 225 | Pfam | Cyclin, N-terminal domain | 53 | 182 | IPR006671 | - | |
Seca10g00654 | 225 | ProSitePatterns | Cyclins signature. | 85 | 116 | IPR006671 | - | |
Seca10g00654 | 225 | Gene3D | - | 184 | 219 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g00654 | Seca-Chr10 | 5995276 | 5998123 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g00654 | 9 | 221 | Core Cell Cycle Gene Families | AT4G37630 | 39.450 | 3.00e-41 | 139 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g00654 | K18811 | - | gmx:100798140 | 334.339 |