Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00645 ATGGATACCTTGTTTAGGCTTGTCAGTTTTCAACAACAACCCCAACCTGATCAATCTCTCAATTCCACCACCAGCAGAACATCCAGCAGCTCTAGATCCTCTAGACAAAACTACCACTACCCACAAGAAGACGAAGAATGCTTCAACTTTTTCATGGATGAAGAGGACTTATCGTCGTCTTCTTCTAGGCACCACTATTATCCCTATCAGCCCCACCCTTCCACTACCAACACCACTACCGCTACCACAATCACAAACACCCCTTCTACCACCACCACCACTGATTTCTCCTTCTCTTTCTCACCCACTCGTGACTTCAACTTCGAATTCTCCGGCAAGTGGGCCCAAGACATCCTTCTAGAAACCGCGGGTGCCATTGCCGACAAAAACAGCTCTCGCCTCCAACAACTCATGTGGATGCTCAACGAACTCAGCTCCCCTTACGGCGACACCGATCAGAAACTCGCCGCTTATTTCCTCCAAGCCTTGTTCTCCCGCATCACCGAAGTTGGAGAACGAACCTACCGAACCTTAACCTCCGCATCGGAAAAAACGTGCTCCTTCGAATCAACCAGGAAAACGGTTTTGAAATTCCAAGAGGTTAGCCCCTGGACTACCTTCGGTCACGTCGCTTGCAATGGCGCCATCTTAGAAGCCTTAGAAGGTGAACCAAAGTTGCACATAATTGATATCAGCAACACCTATTGCACTCAATGGCCTACACTCTTCGAAGCATTGGCCACTCGCACCGACGACACTCCACACCTCCGTTTAACCACCGTCGTTACCGTTAGACCTGGCGGTTCCTCCTCCTCTGTTCAAAAGGTTATGAAGGAAATTGGTACCAGAATGGAGAAATTCGCGAGGCTCATGGGCGTTCCGTTCAAATTCAACGTCGTTCATCACGCCGGCAATCTCTCTGAGTTGGATTTCGCTGAGTTAGACATTAAGGAGGACGAGGCGTTGGCCGTTAACTGCGTTAACGCTCTGCATTCCGTAACTGCCGTTGGTAACCGCCGTGACGCGTTGATAGCTTCTTTGAGAAGATTGCAGCCGAGGATAGTGACAGTGGTGGAAGAGGAAGCTGATTTGGATGTTGGATTTGAAGGATTTGAATTCGTGAAAGGCTTTCAAGAATGCTTGAGGTGGTTTAGGGTTTACTTTGAGGCTTTGGATGAGAGTTTTCCGAGGACAAGCAACGAGCGATTGATGCTTGAACGATCGGCGGGGAGAGCTATCGTTGACTTGGTGGCTTGTGCGGCGTCGGAGTCGACGGAGAGGCGTGAGACGGCGGCGAGGTGGTCGCAGCGTCTGCATGGCGGTGGGTTCAATACGGTGTCGTTTAGTGAGGAGGTTTGTGATGATGTGAGGGCGTTGTTGAGGAGGTATAAGGAAGGGTGGTCAATGACACAGTGTTCCGATGCCGGAATATTCTTGACGTGGAAGGAGCAAGCGGTGGTGTGGGCCAGTGCATGGAGGCCTTGA 1485 0.5057 MDTLFRLVSFQQQPQPDQSLNSTTSRTSSSSRSSRQNYHYPQEDEECFNFFMDEEDLSSSSSRHHYYPYQPHPSTTNTTTATTITNTPSTTTTTDFSFSFSPTRDFNFEFSGKWAQDILLETAGAIADKNSSRLQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRITEVGERTYRTLTSASEKTCSFESTRKTVLKFQEVSPWTTFGHVACNGAILEALEGEPKLHIIDISNTYCTQWPTLFEALATRTDDTPHLRLTTVVTVRPGGSSSSVQKVMKEIGTRMEKFARLMGVPFKFNVVHHAGNLSELDFAELDIKEDEALAVNCVNALHSVTAVGNRRDALIASLRRLQPRIVTVVEEEADLDVGFEGFEFVKGFQECLRWFRVYFEALDESFPRTSNERLMLERSAGRAIVDLVACAASESTERRETAARWSQRLHGGGFNTVSFSEEVCDDVRALLRRYKEGWSMTQCSDAGIFLTWKEQAVVWASAWRP. 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00645 494 MobiDBLite consensus disorder prediction 11 39 - -
Seca10g00645 494 Pfam GRAS domain family 117 493 IPR005202 -
Seca10g00645 494 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 93 485 IPR005202 -
Seca10g00645 494 MobiDBLite consensus disorder prediction 11 37 - -
Seca10g00645 494 ProSiteProfiles GRAS family profile. 106 493 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00645 Seca-Chr10 5928851 5930335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00645 1 494 GRAS Transcription Factor Family AT4G37650 62.570 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca10g00645 GRAS 7.7e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00645 - - gmx:100820459 750.74