Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00640 ATGGCTGCTTGTACTTCGAAGCCACCGATAAGTTTGAGAAGCCAACAAAAAAGTTGGCTAACAGGTGGCCCCACTCGTTTCCAATTCTCGAATTTTGGTTCAAGACTGAGAATTGGAAGGCTGGGCCGTTTCAATCTTGAGAACAAAAAGGCAGGGTTTTTGGTGAGAGGGTGCGGTTGTGACCAAAGACAGAGTAACGGTGGCGAAGACTATGGTGTGACAGAGGAAGACCAATATTTCGTGAAGGTTCTCCGGGAATCCCAGCCTTACATTTCCGTGCACAGGAATAGAGTATTTGTTGTCCTCATATCTGCAGAAATTGTTGCCAGTCCTTACTTGGATCCCATTATCAAGGATATAGCTTTCCTTCATCACCTGGGAATCCGGTTTGTTATTGTTCCGGGGACCCATGTGCAAATTGACAAGCTTTTAACTGAGAGAGGGTGCCAGCCTAAGTATGTTGGTAGATATAGAATAACTGATAAGGAATCTCTAGAAGCTGCAATGGAAGCAGCTGGGGGAATAAGATTGATGATAGAAGCAAAGCTTTCTCCTGGACCTTCCATATGCAATATTCGTCGACATGGTGATAATAGTCGTTGGCATGATGTTGGTGTCAGTGTTGCTAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAATGGAATTGATTTTGGGTCAACTGGGGAAGTTAAAAAAGTAGATGCATCTCGCATGCGTGAGAGACTTGATGCTGGTTGTGTAGTTATTTTAACCAACTTGGGCTACTCCAGCTCTGGAGAAGTGTTAAATTGCAACACCTATGAAGTTGCAACAGCTTGTGCCTTGGCTATTGGAGCAGACAAGTTAATATGCATTATAGATGGTCCAATACTTGATGAGAATGGACGCCTAATTCATTTCTTGCCTCTTCAAGAAGCAGACATGTTGATTCGCAGACGGGCTGAGCAAAGTGAAACAGCTGCTAATTATGTGAAAGCTGTTGATGAAGAAGGTTTCAACTCTCCTGAGCATAACAATTTTAATGGGACAGGCAAATCTCTACCTAATGGACAACACTTTACTGAATGGCATAATGCAACCTTCCACAATGGCATTGGTTTTGAGAATGGAAATGGCTTAGGGTCTAGTGAACAAGGTTTTGCTATTGGAGGTCAAGAGCGGCTTAGTCGAATGAATGGTTATCTGTCAGAACTCGCTGCTGCAGCTTTTGTTTGCAGAGGTGGGGTTCAAAGAGTTCACTTGTTGGATGGTACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGATGGAATGGGAACAATGGTGGCTAGTGACCTTTATGAAGGCACTCGGATGGCACAGTCAAAAGATATGTCTGGAATAAAACAAATTATTCAGCCTTTGGAGGCATCTGGCATATTGGTTAAGCGGACTGATGAAGAGTTGCTACAAACATTGGATCATTTTGTTGTTGTGGAAAGAGAAGGTCAAATAATTGCTTGTGGTGCCCTTTTGCCATACTATGAGGATAAGTGTGGCGAGATTGCTGCCATTGCTGTATCTCCTGATTGTCGCGGCCAAGGACAGGGAGACAAATTGCTTGATTATATGGAGAAGAAAGCATCATCTCTTGGATTGGACATGCTTTTCCTGCTTACAACACGTACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATTGATTATATTCCTGAAAAGAAAAGGAGAATGATCAATCTGTCCCGCAAGTCTAAGTATTATATGAAGAAGCTTCTACCAAATAAAAGTGGAATTACTGTTGGTGGAAAACTTGCTTCAAAGTAG 1827 0.4258 MAACTSKPPISLRSQQKSWLTGGPTRFQFSNFGSRLRIGRLGRFNLENKKAGFLVRGCGCDQRQSNGGEDYGVTEEDQYFVKVLRESQPYISVHRNRVFVVLISAEIVASPYLDPIIKDIAFLHHLGIRFVIVPGTHVQIDKLLTERGCQPKYVGRYRITDKESLEAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHDVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDASRMRERLDAGCVVILTNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDENGRLIHFLPLQEADMLIRRRAEQSETAANYVKAVDEEGFNSPEHNNFNGTGKSLPNGQHFTEWHNATFHNGIGFENGNGLGSSEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQSKDMSGIKQIIQPLEASGILVKRTDEELLQTLDHFVVVEREGQIIACGALLPYYEDKCGEIAAIAVSPDCRGQGQGDKLLDYMEKKASSLGLDMLFLLTTRTADWFVRRGFSECSIDYIPEKKRRMINLSRKSKYYMKKLLPNKSGITVGGKLASK. 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00640 608 Hamap Amino-acid acetyltransferase [argA]. 80 592 IPR010167 GO:0004042|GO:0005737|GO:0006526
Seca10g00640 608 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 449 595 IPR016181 -
Seca10g00640 608 SUPERFAMILY Carbamate kinase-like 79 314 IPR036393 -
Seca10g00640 608 NCBIfam amino-acid N-acetyltransferase 400 592 IPR010167 GO:0004042|GO:0005737|GO:0006526
Seca10g00640 608 CDD NAT_SF 487 549 - -
Seca10g00640 608 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 446 594 IPR000182 GO:0016747
Seca10g00640 608 SUPERFAMILY Carbamate kinase-like 394 442 IPR036393 -
Seca10g00640 608 Pfam Acetyltransferase (GNAT) family 483 551 IPR000182 GO:0016747
Seca10g00640 608 Gene3D - 78 445 IPR036393 -
Seca10g00640 608 Gene3D - 446 592 - -
Seca10g00640 608 CDD AAK_NAGS-ABP 80 440 IPR033719 -
Seca10g00640 608 PANTHER AMINO-ACID ACETYLTRANSFERASE 69 600 IPR010167 GO:0004042|GO:0005737|GO:0006526
Seca10g00640 608 Pfam Amino acid kinase family 112 311 IPR001048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00640 Seca-Chr10 5886937 5898381 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca10g00640 AA_kinase 4.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00640 K14682 - gmx:100777694 979.163