Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00625 ATGCTTTCTGCTCTTCCTGCTTCCGATCCTTTCCTCGGAAACCCATTCTCGGCGTTGGACGGTGGTTTCACGCCGTGGGATTGTCCTGACTTTTCGTCAGCCTTCAACCACGTCACCTCAAGCTCCGGTTCGGATGTCCCAAATAACCAAACCCATGCAGAAGAAGATAAAAAACCGGGCTCAGACCGGGTAGTTATGGACGAGAGAAAGCGAAGGCGAATGATATCGAACCGGGAATCGGCCCGCAGGTCACGCATGCGTAAACAGAGGCATCTAGAGAATTTACGGAACCAGGTGAATCTGTTTAGGATTGAAAACCGTGAACTGAATAACGGTTTGCAGTTCCTTCTTCACCACTGTAACCGTCTACGAACTGAAAACGATTGGCTCAGATCCGAACGAACCATGCTCCGCCAAAAACTGTCCAACATAACTCAAATTTTGGTATTCCAACAACTGCAACCACCTTTCTCCTCCTCTGCATGGCCATGCAATATTGTCACGGCGGAATAA 513 0.4893 MLSALPASDPFLGNPFSALDGGFTPWDCPDFSSAFNHVTSSSGSDVPNNQTHAEEDKKPGSDRVVMDERKRRRMISNRESARRSRMRKQRHLENLRNQVNLFRIENRELNNGLQFLLHHCNRLRTENDWLRSERTMLRQKLSNITQILVFQQLQPPFSSSAWPCNIVTAE. 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00625 170 CDD bZIP_plant_GBF1 70 121 IPR045314 GO:0003700|GO:0006355
Seca10g00625 170 MobiDBLite consensus disorder prediction 38 88 - -
Seca10g00625 170 Coils Coil 78 112 - -
Seca10g00625 170 Pfam bZIP transcription factor 69 127 IPR004827 GO:0003700|GO:0006355
Seca10g00625 170 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 67 130 IPR004827 GO:0003700|GO:0006355
Seca10g00625 170 SMART brlzneu 65 129 IPR004827 GO:0003700|GO:0006355
Seca10g00625 170 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 72 87 IPR004827 GO:0003700|GO:0006355
Seca10g00625 170 MobiDBLite consensus disorder prediction 50 82 - -
Seca10g00625 170 FunFam BZIP transcription factor 67 118 - -
Seca10g00625 170 PANTHER BZIP TRANSCRIPTION FACTOR 44 32 151 - -
Seca10g00625 170 SUPERFAMILY Leucine zipper domain 69 121 IPR046347 GO:0003700|GO:0006355
Seca10g00625 170 Gene3D - 67 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00625 Seca-Chr10 5713115 5713627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00625 2 152 bZIP Transcription Factor Family AT3G49760 39.623 8.60e-30 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca10g00625 bZIP_1 3.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00625 - - gmx:102661188 226.098