Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00604 ATGGATTTGATGGCCATAGATATGGATTTTCACAACACAGCTGGTCCTCAGAAGCACCAATCAGTGGCACTAATGAGAAGCGCAGATGAAGCAGTTTACTACATGTTTGATTTCATTTTTGGCAATTCTGCATCTGTTATCCAAAATTGCAACACTTTGCCTAAGTTACCTATGCATGGCCACCAGAACACAATCACAGCACAGGGAAAATTTGAGTATCTCAATTCAATACTGCAACATTTCACCCTTTGGAAATTTGAGTACTGTCCAAACATATCTCGGAAGACCCTGGAAGAATTACTCAACCACAACATACATAAGATCCAGAACGGAAAGCTTTGTTGA 345 0.4 MDLMAIDMDFHNTAGPQKHQSVALMRSADEAVYYMFDFIFGNSASVIQNCNTLPKLPMHGHQNTITAQGKFEYLNSILQHFTLWKFEYCPNISRKTLEELLNHNIHKIQNGKLC. 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00604 114 PANTHER PECTINESTERASE 31 70 - -
Seca10g00604 114 Pfam Pectinesterase 3 34 IPR000070 GO:0030599|GO:0042545
Seca10g00604 114 Pfam Pectinesterase 36 72 IPR000070 GO:0030599|GO:0042545
Seca10g00604 114 Gene3D - 35 79 IPR012334 -
Seca10g00604 114 SUPERFAMILY Pectin lyase-like 3 70 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00604 Seca-Chr10 5478296 5478732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00604 3 70 Carbohydrate Esterase AT3G10710 48.421 7.88e-22 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00604 - - gmx:100811152 98.2117