Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00595 ATGCGTCTTCTACTTCCACTTTTGCTTCTCTTTTTCTTCTATTTCCATTTCCACCATGCTTTCTCTGCGCCCAAATCAGAGTACCGTGCCCTGCTCTCTCTCCGGGACGCCATTACCGACTCCACCCCACCTGTTCTCTCCTCATGGAACGCCTCAACCACACACTGTTCCTGGTCCGGCGTCACCTGTGACAACCGCCGACACGTCATCGCTATTAACCTTACCGGACTCGGCCTCTCCGGCACACTCTCCGGCGATGTCGCTCACCTCCCATTCCTCTCCAACCTTTCCCTAGCTGACAACAGCTTCTCTGGCCCCATCCCTCCGTCGCTCTCTGCCGTCTCTGGCCTCCGATTCCTGAACCTCTCCAATAACGTTTTCAACGGCACCTTCCCTTCGGAGCTTTCCCTTCTCAAGAACCTTGAGGTTCTCGACCTGTACAACAACAACATGACCGGAGTGCTCCCTCAAGCTGTCACCGAGATGCCGAATCTCCGCCATTTGCATCTCGGAGGGAACTTCTTCTCCGGCCAGATCCCGCCGGAGTACGGACGGTGGCAACACCTGGAGTACCTGGCTGTTTCCGGCAACGAGCTCGACGGAACCATTCCGCCGGAGATCGGGAACCTGAGCAGCCTCCGGGAGCTCTACTTAGGATACTACAACACCTATGAGGGTGGCATTCCGCCGGAGATTGGGAACTTGTCGAAACTGGTGAGGCTCGATGCTGCTTACTGTGGACTATCCGGCGAGTTACCGGCAGAGCTCGGGAAGCTTCAAAAACTGGACACTCTGTTTCTTCAGGTGAATGGGCTTTCAGGGTCTCTGACATGGGAGCTTGGGAACTTGAAGAGCCTCAAGTCCATGGATTTGTCTAACAACTTGCTTACCGGTGAGATTCCGATGAGTTTCGGTGAGCTGAAGAACATGACGCTTCTGAACCTGTTCAGGAACAAGCTTCACGGAGCAATTCCAGAGTTTATAGGTGAGTTGACGAAGTTGGAGGTGGTGCAGTTGTGGGAGAACAATTTCACAGGTAACATTCCAGAGGGTTTGGGCAAGAACGGGAGGCTCACCCTTCTTGACATTTCTTCAAACAAGTTAACTGGGACTCTGCCTCCTTACTTGTGTTCTGGGAATCGTCTTCAAACTCTGATAACTCTGGGGAATTTCCTCTTCGGTCCCATCCCTGAATCCCTTGGGAGCTGCCAATCTCTGAACAGGATTCGAATGGGAGATAACTTTCTCAATGGTTCAATTCCAAAAGGCCTTTTTGGACTTCCTAAACTCATACAGGTTGAGTTGCAGGACAACTATCTTTCTGGAAACTTTCCTGATTCTGTTTCTGCTAATGTTGGTCAAATTACTCTCTCCAACAACCAACTTTCTGGACCCTTGCCTCCTTCTATTGGTAACTTCTCCAGCATGCAGAAGCTCCTTCTCGATGGCAACACCTTCTCGGGTCGGATCCCACCTCAGATTGGGAGGTTACAACAGCTCTCAAAGATTGATTTTAGCCACAACAAGTTCTCCGGTCCTATTGCACCGGAAATTAGTGAGTGTAAGTTGTTAACTTTTGTTGATCTAAGTGGAAATGAGCTCTCTGGAGAGATCCCAAATGAGATCACTAGTATGCGGATATTGAATTACTTGAATCTTTCAAGAAATCATCTAGTTGGTAGCATTCCTCCATCTATATCCTCAATGCAAAGCTTAACTTCTGTTGATTTTTCATATAACAATCTATCTGGTTTGGTTCCTAGCACTGGCCAATTCAGCTACTTTAACTACACGTCCTTCCTAGGCAACCCTGACCTCTGTGGCCCCTATTTGGGTGCTTGCAAGGATGGTGTTGCCAATGGTGCTCACCAATCTCATGCTAAAGGCCCGCTCTCTTCTTCTTTGAAGCTCATACTCGTTATTGGGTTGCTAGCATGTTCTATTATATTTGCTGTTGCAGCAATATTCAAGGCGCGGTCTCTGAAGAAGGCCAGTGAGGCTCGTGCATGGAAATTGACTGCATTCCAACGTTTGGACTTCACTGTTGATGATGTTTTGGATTGCTTGAAGGAGGACAACATAATAGGGAAAGGAGGTGCTGGTATTGTCTATAAGGGGTCAATGCCGAATGGGGAACATGTTGCTGTAAAGAGGCTTCCAGCTATGAGCAGAGGTTCATCCCATGATCATGGATTCAATGCAGAGATTCAGACATTGGGGAGAATCCGGCATAGGCACATTGTTAGATTGTTGGGTTTCTGTTCAAATCATGAGACAAATCTTTTGGTCTATGAATACATGCCCAATGGAAGTTTAGGTGAAGTTCTTCATGGAAAGAAAGGGGGTCATTTACATTGGGACACTAGGTATAATATTGCTGTGGAGGCTGCAAAGGGGCTCTGCTATCTACACCATGACTGTTCACCACTAATCGTTCATCGAGATGTAAAATCAAACAACATTCTTCTTGATACTAATTATGAAGCCCATGTTGCTGATTTTGGGCTTGCCAAGTTCCTGCAAGATTCTGGAACATCCGAATGCATGTCTGCAATTGCCGGTTCATATGGATACATAGCTCCAGAGTATGCCTATACATTGAAAGTTGATGAGAAGAGCGATGTGTACAGCTTTGGTGTGGTTCTTTTAGAGCTTATAACAGGAAGGAAACCAGTAGGAGAATTTGGTGATGGCGTGGACATTGTCCAATGGGTGAGGAAAATGACAGACTCTAATAAGGAAGGGGTTCTAAAAGTTCTTGATCCTAGACTTTCCTCAGTTCCCCTTCATGAAGTGATGCATGTTTTCTACGTAGCTGTGCTCTGTGTTGAAGAACAGGCAGTAGAGAGACCAACTATGCGGGAAGTTGTTCAAATTCTGACTGAGATTCCAAAGCCACCTGGCTCTAAACAAGGGGACTTAACAATTACAGAGTCCTCTTTGTCATCATCAAACGCTTTAGAATCTCCAGCAGCAGCTTCTAAAGAGGATCAACATCCTCCTCAATCCCCACCACAAGATCTTCTTAGCATTTGA 3036 0.4717 MRLLLPLLLLFFFYFHFHHAFSAPKSEYRALLSLRDAITDSTPPVLSSWNASTTHCSWSGVTCDNRRHVIAINLTGLGLSGTLSGDVAHLPFLSNLSLADNSFSGPIPPSLSAVSGLRFLNLSNNVFNGTFPSELSLLKNLEVLDLYNNNMTGVLPQAVTEMPNLRHLHLGGNFFSGQIPPEYGRWQHLEYLAVSGNELDGTIPPEIGNLSSLRELYLGYYNTYEGGIPPEIGNLSKLVRLDAAYCGLSGELPAELGKLQKLDTLFLQVNGLSGSLTWELGNLKSLKSMDLSNNLLTGEIPMSFGELKNMTLLNLFRNKLHGAIPEFIGELTKLEVVQLWENNFTGNIPEGLGKNGRLTLLDISSNKLTGTLPPYLCSGNRLQTLITLGNFLFGPIPESLGSCQSLNRIRMGDNFLNGSIPKGLFGLPKLIQVELQDNYLSGNFPDSVSANVGQITLSNNQLSGPLPPSIGNFSSMQKLLLDGNTFSGRIPPQIGRLQQLSKIDFSHNKFSGPIAPEISECKLLTFVDLSGNELSGEIPNEITSMRILNYLNLSRNHLVGSIPPSISSMQSLTSVDFSYNNLSGLVPSTGQFSYFNYTSFLGNPDLCGPYLGACKDGVANGAHQSHAKGPLSSSLKLILVIGLLACSIIFAVAAIFKARSLKKASEARAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGSMPNGEHVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYNIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDTNYEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLSSVPLHEVMHVFYVAVLCVEEQAVERPTMREVVQILTEIPKPPGSKQGDLTITESSLSSSNALESPAAASKEDQHPPQSPPQDLLSI. 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00595 1011 Gene3D Ribonuclease Inhibitor 24 179 IPR032675 -
Seca10g00595 1011 Gene3D Ribonuclease Inhibitor 180 274 IPR032675 -
Seca10g00595 1011 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 84 327 - -
Seca10g00595 1011 SMART serkin_6 689 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00595 1011 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 767 977 - -
Seca10g00595 1011 Gene3D Ribonuclease Inhibitor 275 346 IPR032675 -
Seca10g00595 1011 Gene3D Phosphorylase Kinase; domain 1 655 766 - -
Seca10g00595 1011 Pfam Protein tyrosine and serine/threonine kinase 691 960 IPR001245 GO:0004672|GO:0006468
Seca10g00595 1011 Pfam Leucine rich repeat 116 173 IPR001611 GO:0005515
Seca10g00595 1011 SUPERFAMILY Protein kinase-like (PK-like) 682 960 IPR011009 -
Seca10g00595 1011 MobiDBLite consensus disorder prediction 972 991 - -
Seca10g00595 1011 SUPERFAMILY L domain-like 356 611 - -
Seca10g00595 1011 ProSiteProfiles Protein kinase domain profile. 689 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00595 1011 MobiDBLite consensus disorder prediction 964 1011 - -
Seca10g00595 1011 Gene3D Transferase(Phosphotransferase) domain 1 767 975 - -
Seca10g00595 1011 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Seca10g00595 1011 Gene3D Ribonuclease Inhibitor 347 618 IPR032675 -
Seca10g00595 1011 SMART LRR_typ_2 331 355 IPR003591 -
Seca10g00595 1011 SMART LRR_typ_2 545 568 IPR003591 -
Seca10g00595 1011 SMART LRR_typ_2 138 161 IPR003591 -
Seca10g00595 1011 SMART LRR_typ_2 356 379 IPR003591 -
Seca10g00595 1011 SMART LRR_typ_2 569 592 IPR003591 -
Seca10g00595 1011 SMART LRR_typ_2 283 306 IPR003591 -
Seca10g00595 1011 SMART LRR_typ_2 162 186 IPR003591 -
Seca10g00595 1011 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 658 766 - -
Seca10g00595 1011 SUPERFAMILY RNI-like 72 416 - -
Seca10g00595 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Seca10g00595 1011 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 335 618 - -
Seca10g00595 1011 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 222 962 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00595 Seca-Chr10 5419383 5423734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00595 16 990 Receptor kinase-like Gene Family AT5G65700 79.817 0.0 1583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Seca10g00595 PK_Tyr_Ser-Thr 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00595 - - ccaj:109800149 1790.39