Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00594 ATGATGGAAATTGCGTCCCCTAACTATTTCCCTGAACTTGGAATGGAGGATCCAACCTTCTTTCATCAATACCCGATGGATTCTTTTGCATGTCCACTCGATGACTTTGACTTGCAGTGTTTCAACTACGAAAGCACACCAAATATTTTCCCTGCTGAAAGTCCTGTTGCCCCTGCAAGGCCAACCAAGAAGCTCAAGATCACTTCCTGCGCCTCCAACCCTGACCTTCCTTCCTCCCAACTTATTTCTTTTGAGCACTTCAATGCACCATCATCAATTCCTTCCCAGCAATTTCACAACCTGGATTCCAATATCAAGCCTAAAATCGAGAATATCGAAGCTCTGATTTCATATGAGGACAAACTTTTCTCAAATCATGATAATCTAGCGAACCACCAGCAGGTTGCCATCACCACAACCAGGAACCCAATCCAAGCTCAAGAACACATGGATAAGGCTTCTGTGTTGGGAGATGCTATCAAGTATGTGAAACAACTAAAGGAGCGCGTGCAGACTCTGGAGGAACAAGCTGCCAACAAATCGGCAGTACTTGTAAAGAGATCTATTCTGTTTTCAGATGATGATAGCGACGACAGCTATGGAGACCAACCACTCCCTGGAATTGAAGTTAGAGTTTCTGGTAAAGACGTGCTCATCAAGATTCAATGCGATAAACACAGTGGCCGTGCGGCTACTATACTTACTCAATTAGAAAAGCATCATCTCACTGTACAGAGTAGCACCTTCTTGCCCTTCGGGAACAATATTATTGATGTAACTATTGTTGCTCAGATGAACAAGGAAAAATGCATGACAGCTAAGGATCTACTACAAAGCCTACGGCAGGCATTGATTTGA 858 0.4359 MMEIASPNYFPELGMEDPTFFHQYPMDSFACPLDDFDLQCFNYESTPNIFPAESPVAPARPTKKLKITSCASNPDLPSSQLISFEHFNAPSSIPSQQFHNLDSNIKPKIENIEALISYEDKLFSNHDNLANHQQVAITTTRNPIQAQEHMDKASVLGDAIKYVKQLKERVQTLEEQAANKSAVLVKRSILFSDDDSDDSYGDQPLPGIEVRVSGKDVLIKIQCDKHSGRAATILTQLEKHHLTVQSSTFLPFGNNIIDVTIVAQMNKEKCMTAKDLLQSLRQALI. 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00594 285 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 147 177 IPR036638 GO:0046983
Seca10g00594 285 Gene3D - 102 187 IPR036638 GO:0046983
Seca10g00594 285 PANTHER BHLH TRANSCRIPTION FACTOR 150 284 - -
Seca10g00594 285 Coils Coil 156 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00594 Seca-Chr10 5407762 5410530 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00594 2 284 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 31.595 2.11e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00594 - - gmx:100791810 326.635