Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00593 ATGAAGAATGGATCTTTGGATAAATGGGTCTTCCCTTCATATCAAGGGCGGGATAGATTGCTAGATTGGTCAACTTGTTTTGAAATAGCCACAGCTCCTGCACAAGGGATTGCATACTTTCATAAGCAGTGCAGAGATCGGATAATACATTGTGACATCAAACCAGAAAATATATTCAGATGA 183 0.3934 MKNGSLDKWVFPSYQGRDRLLDWSTCFEIATAPAQGIAYFHKQCRDRIIHCDIKPENIFR. 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00593 60 PANTHER OS07G0415500 PROTEIN 1 58 - -
Seca10g00593 60 SUPERFAMILY Protein kinase-like (PK-like) 1 59 IPR011009 -
Seca10g00593 60 ProSiteProfiles Protein kinase domain profile. 1 60 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00593 60 Gene3D Transferase(Phosphotransferase) domain 1 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00593 Seca-Chr10 5400887 5401069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00593 1 59 Receptor kinase-like Gene Family AT1G66910 42.373 1.11e-12 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Seca10g00593 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00593 - - gmx:100794281 115.161