Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00570 ATGAAGAAGGCAAGGAGAGGAAAACGCTCTGAGGCATTTTGGCCTTCCATTGTGATGAAAAAATGGTTAAACATCAAGCCTAAGGTGAATGATTTTAGTGAAGATGAAGTGGAAACTGAAACTGAGAGTGAAGATGATGCTTGCTCTCTTAAAGAATCAAGAATGCGTGTGTGTGAAGATAAGCCACTTAGAACACAAGGGATTCAATCCATATTCTCAAGACAAACATCTGATGCATCTTGTACTAAGGGCTACAAAACAAGACACAGAAGAGGCAAATCAGAAACTCTGCGTGCTCAGTACATAAACACAAAGGAAGTGAGGGTAACAATTGGCACTTGGAATGTTGCTGGAAGATCTCCATGTGAGGATCTTGAGATTGATGATTGGCTTTCTACTGAAGACCCAGCAGATATTTACATTCTTGGTTTTCAGGAGGTAGTTCCACTGAATGCTGGAAATGTACTGGGAGCAGAGGATAATACACCTATTCCAAAATGGGAGGCAATAATTAGAAGATCTCTAAACAAATCTTATGAGGAGCCTGAAAGTAAAGTGAAAAGCCACAGTGCCCCTCCTTCTCCAGTGTTAAGAACTTCTTCTGCTGCTGATGTTCTAGCTGACAATTTAGATGTTTCTAATCCATTAGATATGATGAATGAGGAGTACATAGGAACTGTTGACAATTATGAGCTGGAAAAGCTTGAAGTGAATGACATAATTGGTATAGGGAATGATTTACGGTTGAGTAAATTATATGGCATTGATCTTGACTGGCCTGAACGTCCATTAGATGCAGTCTCTCAAATTGTTGATTCCAATCCAAAGTTGCGGAGAGTGCTAAGCAGCTCAGCTAGAATTGGCTTTAATTGGTCTGATAATGCTTTGATATATGGTGGTGGAATGAAACGTTCACACCACAGTTCAGGAAACTTGGGTTTGTTATGGAAAGAGCAACAAGTCATACCTGAAGTAGTAGATGATTCCTTAACTGATGTCCCTGACATGATATCCAATGAGGATGATACTTTTTTTGAATTACCTGATAACCAAGATGATTATGGTCATGGGTTAGGCTCCATGAAATCACGCCCAAAGTATGTTAGGATTGTCAGTAAACAAATGGTAGGTATATATGTATCTATTTGGGTGCAGAGAAGGTTGAGAAGGCACATTAACAATTTGAAAGTTTCCCCTGTTGGAATTGGTCTAATGGGCTACATGGGAAACAAGGGGTCTGTTTCAGTTAGCATGTCTCTCTTTCAGTCACGTTTATGCTTTGTTTGTTCCCATCTGACTTCTGGTCAGAAGGATGGAGCTGAACAGAGGAGAAACTCTGATGTTCATGAAATTATAAGACGCACTTGCTTCTCATCTGTCTTTGATGCAGATCAACCACAAACAATCCCATCTCACGATCAGATTTTCTGGTTCGGGGATTTGAATTATCGTATCAGTATGTTAGATGCTGAGGTTCGAAAATTGGTGGCTCTAAAAAAGTGGGATGAACTCATGAATCATGATCAGCTAAGCAAAGAATTGCGTGTTGGGCATGTATTTGATGGATGGAAAGAGGGTTTGATAAACTTCCCACCTACTTACAAGTATGAAATTAACTCTGATAGATATGCGGGTGAGAGCCCAAAAGAAGGGGAAAAGAAGAGATCTCCAGCATGGTGTGATCGTATATTGTGGCTAGGAAAAGGAATAAAGCAACTACAATATGGACGTGCAGAAATTAAGCTCTCAGATCATCGGCCAGTTAGTTCAATCTTCTTGGTTGAAGTTGAAGTATTTGACCATCGAAAGCTAAAAAGAGCTCTAAATTTCACTAGTACTGCAGCAGTACACCCAGAGATTTTCCCTGATGAAGATGAATTGATCTGCCACAGTGCCACTACTATTACTTCAACTCTGAGTGGCAGTGAACTTCTTGTTCATGACTACTACATGGAGAATTGTCCCTTAGCTGAAGACATCGTGAGACATAACGTGGAGGTAGCAGTTTTAAAAGATCCTCGTTTGGCAGCCTCGCTACTTCGCTTACATTTTCATGATTGTTTTGTGATGGGGTGCGATGCATCTGTACTTTTGGACAGCGTTGAGGGCATGGCAAGTGAAAAGCAGGCAGGACCAAATCTCAATTCTTTACGTGGATTTGAGGTCATAGATAAGATTAAGTATTTGCTGGAAGAGGAATGTCCTCTCACTGTTTCATGTGCTGACATCCTTGCCATGGCTGCTCGTGATGCTGTTGAACTGAGAGGAGGACCAAGATGGGAAGTGTTGCTGGGGAGGAAGGACTCTCTGGAGTCAAGTTTCAGTGGAGCTAACCTATTCATTCCTGCTCCAAATTCCACTTTAGAGGCTCTCATCAATAATTTTAAGCAACAGGATCTGGACATAGGAGACTTGGTGGTCCTATCAGGTAGCCATACTATAGGAAGGGCAAGATGTCTAAGCTTCAGGCAGAGGATCTATGAACCAAAACAAGAATATCACTATGGCTATGATCGCTATAAAAGATACACAAGCTTCAGAAGAATCCTACGGTCCATATGCCCTGTTACAGGAAGGGACAACAAATTTGCACCTTTGGATTTTCAAACCCCAAAAAGGTTTGATAACCACTACTTCATAAACATTCTCGAAGGGAAGGGCTTGTTAGGTTCTGATAATGTTTTGATAACTGAGGACTTTGATGGAAAGATTACGGAGCAGGTGTGGGCTTATGCCTCCAACGAGGAACTTTTCTTTGCTTCATTTGCTAAATCTATGATTAAGATGGGAAACATTAATGTTCTTACAGGAAATGAAGGAGAAATTAGGAGGAACTGTAGGTTTGTTAATGCCTAG 2856 0.4086 MKKARRGKRSEAFWPSIVMKKWLNIKPKVNDFSEDEVETETESEDDACSLKESRMRVCEDKPLRTQGIQSIFSRQTSDASCTKGYKTRHRRGKSETLRAQYINTKEVRVTIGTWNVAGRSPCEDLEIDDWLSTEDPADIYILGFQEVVPLNAGNVLGAEDNTPIPKWEAIIRRSLNKSYEEPESKVKSHSAPPSPVLRTSSAADVLADNLDVSNPLDMMNEEYIGTVDNYELEKLEVNDIIGIGNDLRLSKLYGIDLDWPERPLDAVSQIVDSNPKLRRVLSSSARIGFNWSDNALIYGGGMKRSHHSSGNLGLLWKEQQVIPEVVDDSLTDVPDMISNEDDTFFELPDNQDDYGHGLGSMKSRPKYVRIVSKQMVGIYVSIWVQRRLRRHINNLKVSPVGIGLMGYMGNKGSVSVSMSLFQSRLCFVCSHLTSGQKDGAEQRRNSDVHEIIRRTCFSSVFDADQPQTIPSHDQIFWFGDLNYRISMLDAEVRKLVALKKWDELMNHDQLSKELRVGHVFDGWKEGLINFPPTYKYEINSDRYAGESPKEGEKKRSPAWCDRILWLGKGIKQLQYGRAEIKLSDHRPVSSIFLVEVEVFDHRKLKRALNFTSTAAVHPEIFPDEDELICHSATTITSTLSGSELLVHDYYMENCPLAEDIVRHNVEVAVLKDPRLAASLLRLHFHDCFVMGCDASVLLDSVEGMASEKQAGPNLNSLRGFEVIDKIKYLLEEECPLTVSCADILAMAARDAVELRGGPRWEVLLGRKDSLESSFSGANLFIPAPNSTLEALINNFKQQDLDIGDLVVLSGSHTIGRARCLSFRQRIYEPKQEYHYGYDRYKRYTSFRRILRSICPVTGRDNKFAPLDFQTPKRFDNHYFINILEGKGLLGSDNVLITEDFDGKITEQVWAYASNEELFFASFAKSMIKMGNINVLTGNEGEIRRNCRFVNA. 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00570 951 Gene3D Endonuclease/exonuclease/phosphatase 338 619 IPR036691 -
Seca10g00570 951 SMART i5p_5 317 600 IPR000300 GO:0016791|GO:0046856
Seca10g00570 951 SUPERFAMILY DNase I-like 98 610 IPR036691 -
Seca10g00570 951 Pfam Endonuclease/Exonuclease/phosphatase family 112 585 IPR005135 GO:0003824
Seca10g00570 951 FunFam Type I inositol polyphosphate 5-phosphatase 2 87 200 - -
Seca10g00570 951 FunFam Peroxidase 648 794 - -
Seca10g00570 951 ProSitePatterns Peroxidases active site signature. 676 687 IPR019794 GO:0004601
Seca10g00570 951 FunFam Peroxidase 782 929 - -
Seca10g00570 951 SUPERFAMILY Heme-dependent peroxidases 646 950 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca10g00570 951 CDD secretory_peroxidase 645 949 IPR033905 GO:0004601|GO:0042744
Seca10g00570 951 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 18 616 IPR045849 GO:0004445
Seca10g00570 951 Gene3D - 648 950 - -
Seca10g00570 951 PRINTS Plant peroxidase signature 654 673 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00570 951 PRINTS Plant peroxidase signature 718 731 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00570 951 PRINTS Plant peroxidase signature 678 698 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00570 951 PRINTS Plant peroxidase signature 803 815 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00570 951 PRINTS Plant peroxidase signature 865 880 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00570 951 PRINTS Plant peroxidase signature 881 898 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00570 951 PRINTS Plant peroxidase signature 737 747 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00570 951 PRINTS Plant peroxidase signature 924 937 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00570 951 PRINTS Plant peroxidase signature 756 771 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g00570 951 ProSiteProfiles Plant heme peroxidase family profile. 644 950 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g00570 951 Pfam Peroxidase 661 906 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g00570 951 PRINTS Haem peroxidase superfamily signature 738 755 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g00570 951 PRINTS Haem peroxidase superfamily signature 756 768 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g00570 951 PRINTS Haem peroxidase superfamily signature 804 819 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g00570 951 PRINTS Haem peroxidase superfamily signature 676 690 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g00570 951 PRINTS Haem peroxidase superfamily signature 867 882 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g00570 951 Gene3D Peroxidase, domain 2 782 929 - -
Seca10g00570 951 FunFam Type I inositol polyphosphate 5-phosphatase 2 302 619 - -
Seca10g00570 951 Gene3D Endonuclease/exonuclease/phosphatase 88 192 IPR036691 -
Seca10g00570 951 ProSitePatterns Peroxidases proximal heme-ligand signature. 804 814 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00570 Seca-Chr10 5165274 5173074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00570 704 950 Peroxidase AT2G35380 68.421 4.33e-120 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00570 K24221 - ccaj:109800886 1036.17