Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00538 ATGGAAGTTAGTCAGCATAGCAAATTTTTCTGTGAGTTCTGTGGAAAGTATGCTGTGAAAAGGAAGGCTGTAGGAATATGGGGATGCAAGGATTGTGGGAAAGTAAAAGCAGGAGGTGCCTACACTTTGAATACTGCTAGTGCTGTGACTGTGCGGAGCACCATCCGGAGGTTGAGGGAACAAACAGAGGGTTGA 195 0.4615 MEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTEG. 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00538 64 Gene3D - 1 64 IPR011331 GO:0003735|GO:0005840|GO:0006412
Seca10g00538 64 SUPERFAMILY Zn-binding ribosomal proteins 1 54 IPR011332 GO:0006412
Seca10g00538 64 Pfam Ribosomal L37ae protein family 1 60 IPR002674 GO:0003735|GO:0005840|GO:0006412
Seca10g00538 64 PANTHER 60S RIBOSOMAL PROTEIN L37A-2 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00538 Seca-Chr10 4760451 4761907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00538 1 64 Cytoplasmic Ribosomal Protein Gene Family AT3G60245 93.750 2.63e-41 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00538 K02921 - gmx:100499850 135.961