Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g00534 | ATGGAGGAACGGTATGAGCCATTGAAGGATCTTGGTTCGGGGAACTTTGGAGTGGCCAAGCTAGCCAAAGACAAGAACACAGGGGACCTTGTTGCTGTCAAATACATTGAAAGGGGAAAAAAGCCCTTTCTTCTGAGTGAGTTATGTTTGTGGAATCAGATTGATGAGAATGTTCAAAGGGAGATAGTTAACCACCGATCTCTAAGGCATCCAAATATTGTCAGGTTCAAAGAGGTATTTCTGACCCCTACTCATTTAGCTATTGTCCTGGAGTATGCTGCTGGTGGTGAACTCTTTGAGAGGATATGCGCCGCTGGTCGATTGAGTGAAGATGAGGCAAGATATTTCTTCCAGCAACTATTATCTGGAGTTAGCTACTGTCATTCCATGCAAATTTGTCATAGAGATCTGAAATTGGAAAACACTCTGTTGGACGGAAATCCAGCTCCAAGACTTAAAATTTGTGACTTTGGTTTCTCCAAGGTTAATGATAGCATTATTAATATTCAATTGCAGTCCGCTTTGCTGCACTCTCAACCTAAATCCACAGTTGGAACTCCTGCATACATTGCTCCAGAGGTTTTGTCACGAAAGGAGTATGATGGAAAGATTGCAGATGTTTGGTCGTGTGGTGTGACTCTTTATGTCATGTTAGTTGGATCATACCCATTTGAAGATCCAGAAGATCCTAGAAATTTCAGAAAGAATGTTGGGAGAATAATGAGTGCTCAATACGCCATACCTGACTATGTACGTGTATCTGCAGAGTGTAGGCATCTTCTCTCTCGTATCTTTGTTGCCAATCCTGCCAAAAGGATCACCATCTCTGAGATAAAACAACACCCTTGGTTTCGGAAGAACTTGCCTAGAGAGATAATTGAGGCTGATAAAAAAGGTTACGAGGGAACAGAGAAAGACCAACCAAGCCAAAGTGTAGAAGAAATCATGCGAATCGTACAAGAGGCAAGGACACCAGGGCTAAAAACCACAGGCTCATCGGATGCTGTGGATGTTGATGAGACTGTTGAGGAAGTTGATGTCAGTGGCGACTATGCAAAACTCGTGTAG | 1068 | 0.4279 | MEERYEPLKDLGSGNFGVAKLAKDKNTGDLVAVKYIERGKKPFLLSELCLWNQIDENVQREIVNHRSLRHPNIVRFKEVFLTPTHLAIVLEYAAGGELFERICAAGRLSEDEARYFFQQLLSGVSYCHSMQICHRDLKLENTLLDGNPAPRLKICDFGFSKVNDSIINIQLQSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGSYPFEDPEDPRNFRKNVGRIMSAQYAIPDYVRVSAECRHLLSRIFVANPAKRITISEIKQHPWFRKNLPREIIEADKKGYEGTEKDQPSQSVEEIMRIVQEARTPGLKTTGSSDAVDVDETVEEVDVSGDYAKLV. | 356 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g00534 | 355 | PANTHER | SERINE/THREONINE KINASE | 3 | 310 | - | - | |
Seca10g00534 | 355 | CDD | STKc_SnRK2 | 4 | 283 | - | - | |
Seca10g00534 | 355 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 132 | 144 | IPR008271 | GO:0004672|GO:0006468 | |
Seca10g00534 | 355 | Gene3D | Transferase(Phosphotransferase) domain 1 | 93 | 292 | - | - | |
Seca10g00534 | 355 | SMART | serkin_6 | 5 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g00534 | 355 | FunFam | Serine/threonine-protein kinase SRK2E | 93 | 292 | - | - | |
Seca10g00534 | 355 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 92 | - | - | |
Seca10g00534 | 355 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 291 | IPR011009 | - | |
Seca10g00534 | 355 | ProSiteProfiles | Protein kinase domain profile. | 5 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca10g00534 | 355 | ProSitePatterns | Protein kinases ATP-binding region signature. | 11 | 34 | IPR017441 | GO:0005524 | |
Seca10g00534 | 355 | Pfam | Protein kinase domain | 5 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g00534 | Seca-Chr10 | 4724607 | 4728932 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g00534 | 4 | 287 | CBL-interacting serine-threonine protein kinases | AT5G35410 | 42.254 | 7.79e-71 | 224 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_OST1L | Seca10g00534 | Pkinase | 1.4e-68 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g00534 | K14498 | - | gmx:547790 | 557.755 |