Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00507 ATGATCCAAGGAGCTGGGGGATATATGGCTCCTGAATGGTTCAAGAATGGTCCGGTGACTGTAAAAATGGATGTTTATAGCTTTGGTGTCATGTTATTGGAAATCATTTGTTGCAGAAAAAGTGTGTTGCCAATGGATTCCAGGGAGGGAGAGAAGGCAATAATAACAAATCGGGCTTACTATTGCTATATGGAAGGAAGACTTAAGTGA 210 0.4095 MIQGAGGYMAPEWFKNGPVTVKMDVYSFGVMLLEIICCRKSVLPMDSREGEKAIITNRAYYCYMEGRLK. 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00507 69 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 68 - -
Seca10g00507 69 ProSiteProfiles Protein kinase domain profile. 1 69 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00507 69 SUPERFAMILY Protein kinase-like (PK-like) 4 58 IPR011009 -
Seca10g00507 69 Pfam Protein tyrosine and serine/threonine kinase 8 50 IPR001245 GO:0004672|GO:0006468
Seca10g00507 69 Gene3D Transferase(Phosphotransferase) domain 1 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00507 Seca-Chr10 4491700 4491909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00507 1 68 Receptor kinase-like Gene Family AT3G51550 39.706 1.39e-12 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Seca10g00507 PK_Tyr_Ser-Thr 8.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00507 - - lja:Lj2g3v1989170.1 103.219