Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00500 ATGGAAAAAGTGTGCTTTATATATTCTATAGCCCTGGTAGACTTGACCTTGCGTCTTTCTGTATTCCCAACCCAAGTGATGGGTACACCCATCTTCCTCATTCTCTTCTGGGTTTTCAGCTTCCAAAGCTCTGTCATTGAGGTGCATTCCCAAGATGCTGGTCCTGACATCCGCTATCCATTTCACATAAAAGGTGAGCAGCCCCTCTATGAAGCCCTTCCTGGCTTTGAGCTGCTTCGCAAAAACAACTTCACCACTATCCACTTTCCATCTTATGGGGATTTGGTTGTCAAGTCCATTTCTTATGACACCAAAAAGATTGATCTTCTTGACCCAAAAAATTGTACCCACCAAGTCTTTCTTAACCTCAATCTCACACTCACACCGTTCCACCACTACAATGTTCTGAAAAACTACACATACCTCAATTGCTCCACTAGCCTTCCACCTCCTTTGATGGAGGTTCCATGTTTAAGTGCTTCAATTTATCATGTTTACACAGTTGACCCTGCACTGCCTGTGCCGGGTTCTTGTAAGGGAATCAAGACCGTTGCTATTCCTTTCAAATATAGCCCTTATCTCTCAGATAACAGTCTTGGTCTTAGATTAACATGGGACTTGCGTGAATCTGAATACAGCAAAGCAGGGAACCATACAAGATATTCCCACACAGCACGCAATACTGTTTTGGGCCTCAGTATCTGTATCTTCGTGATGGCAACACTTATAAGCATAATAAAGGTTGGTATGTCCACGAGTAATTTCCATAAGAAAGAAGGGCAGTTGTTGCAGAGTCTTGCAGATTTCTAG 810 0.4296 MEKVCFIYSIALVDLTLRLSVFPTQVMGTPIFLILFWVFSFQSSVIEVHSQDAGPDIRYPFHIKGEQPLYEALPGFELLRKNNFTTIHFPSYGDLVVKSISYDTKKIDLLDPKNCTHQVFLNLNLTLTPFHHYNVLKNYTYLNCSTSLPPPLMEVPCLSASIYHVYTVDPALPVPGSCKGIKTVAIPFKYSPYLSDNSLGLRLTWDLRESEYSKAGNHTRYSHTARNTVLGLSICIFVMATLISIIKVGMSTSNFHKKEGQLLQSLADF. 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00500 269 Pfam Wall-associated receptor kinase galacturonan-binding 55 110 IPR025287 GO:0030247
Seca10g00500 269 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 32 227 IPR046948 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00500 Seca-Chr10 4398148 4400526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00500 58 223 C3H Transcription Factor Family AT2G25410 30.220 1.47e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00500 - - gmx:100790327 333.954