Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00473 ATGGGGGTGATGGAAGATGTAGCACTAATTGGAGGATTGATAGGAGTTCAATTCATCTACGCAGGGAACGCTGTGCTGATGGGTTATTCTATGTCATTGGGCCTCACCCCTCTTACCATTATCATTTTAACTTCCCTGGCTACATTCCTTATTCTCTTCCCCCTTGCCTTTTGTTTTGAAAGGAGGAAGTGGCCCAAGAATTGCAGTTTAAAGTTGATTATACAGCTATTGTTTCTTTCATTTGGAGGATTAGCTTTTCAGTCTTTATTCCTCAAAGGAATCAATCTAACTTCGCCAGCAATGGGAACTGCCATGCCAAACCTTGCCCCAGGTCTTATCTTCATCATCGCATGGACTTTTGGGTTAGAGAAAGTCAACTTAAGCAACAAGCATAGTCGAGTAAAAATCTTTGGAACATTGCTTTGTGTCGTGGGTGCTCTTACAATGAGCATAATGCAAAGCATTTCTGCTCCTGCAACCCAGAAAGAGGTGGCTACAGTTCAATTATCATCAACACCATCAGATTTTATCTTTGACATGCAGAAGATAATCGGTTGCCTCTATCTCATGGCTTCAGTCTTAATATTGTCAAGCAGCATTGTCTTGCAGGCTTTTGCTCTTGGAGATTTTCCTGCACCAATGTCCTTGAGCGCAATAACGTCCTTGTTAGGGGGGTTGATGACTGCAATCGTTCAGTTACTTGAAGATCACGAGCTGAAAAGTGGTTGGCAACTTGTGAATTTTAGAGACCTGATTGGCTATTCTTTTCTGGTAGGTGCAATGAGTGGAATATGCCTAAGCTTCAACGGGTGGGCACTTAAGAAGAGAGGGCCAGTCTTTGTCTCCATGTTTAACCCCATTGGAACAGTATGCTCCGTCATTTTCTCCGTCGTTACCTTAGGAGATACTATCAATATTGGAAGCCTTGCAGGTATGTTCCTCATGTTCACTGGACTCTACTTAGTTCTTTGGGCCAAAGGGAAAGAAGGATATGCAGATCATGGAAGTGTTTTAGAGAGTGAGTTTGATGCAGACAGGCCTCTTTTATCTTGA 1053 0.4274 MGVMEDVALIGGLIGVQFIYAGNAVLMGYSMSLGLTPLTIIILTSLATFLILFPLAFCFERRKWPKNCSLKLIIQLLFLSFGGLAFQSLFLKGINLTSPAMGTAMPNLAPGLIFIIAWTFGLEKVNLSNKHSRVKIFGTLLCVVGALTMSIMQSISAPATQKEVATVQLSSTPSDFIFDMQKIIGCLYLMASVLILSSSIVLQAFALGDFPAPMSLSAITSLLGGLMTAIVQLLEDHELKSGWQLVNFRDLIGYSFLVGAMSGICLSFNGWALKKRGPVFVSMFNPIGTVCSVIFSVVTLGDTINIGSLAGMFLMFTGLYLVLWAKGKEGYADHGSVLESEFDADRPLLS. 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00473 350 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020
Seca10g00473 350 Pfam EamA-like transporter family 14 150 IPR000620 GO:0016020
Seca10g00473 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 328 - -
Seca10g00473 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 151 - -
Seca10g00473 350 PANTHER WAT1-RELATED PROTEIN 13 330 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00473 Seca-Chr10 4181737 4186314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00473 4 333 Nodulin-like Gene Family AT5G47470 57.530 4.67e-134 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00473 - - aprc:113870214 521.546