Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00451 ATGGCGAGTGGTTGGATGAAGTCATTGCAATGCAAGTCCAAAGCATTTGAAGACGTTTATCACCCAAACACCAAACACCTCATACCCAGTGCCAGTTGCAGAAAGAGCGTTCAAAGCATCAAAGACGTTGTTGACACAACCAAGCCCAAGCCCAAGCCCAAGAAGCAAAAACCCCTTCAAAAACACCCCAGCTCCAGATACCCATCCACTTCCACCAAACCCGATTTTGAAACCACCATCAACCGCTCCCGGAGCACCACCACTACCACCTCACGCCATGCTCCTACACCTGACCCTCGCTTCCCTTCCCTCACGGAGCTCACTGAGGGACATCCTTCACGCAACGTCGTGGAGATTATCTTCCACACTAGCTGGGGACCCAAACCTTTTTCGGGTCGGGTTGAGATGATATTCAAAGTCCACAACGGCTCCCGAACCGTTTCCCGGTTCGAAGAGTATCGTGAAGCGGTTAAAGGTCGAGCCGGTTCGGCCAGCCCGACCCGGGGGAGCAACTGGGAGGAGAATGCAAGGTGCGTCGCGGATGGGAATGAGGTGATGAGGTTTCACTGTTTGGGTCCCACATCGGGAGGTGGTCCCTACGGCGGAGCTTGTGCATGGTCCTTCCCCGGAAGCAAGGGATCGGCGATCTGCACATTCTCCGGCAGCGGCGGCGCCCATGAGAACTCCGGCGGAGGAAAGGGCAGAAAGGCTATGTTGGTGTGCCGAGTCATAGCGGGTCGGGTTTCGAAACAACTAGGGTTTATGGACTCGTTGTTGGACGGGCGAGTTGGGTTCGACTCGGTGAGTGGGGACAACGGCGAGTTGTTAGTGTTTGACTCGCGTGCTGTATTGCCCTGTTTTCTTATCATTTATAAATTGTAA 882 0.5431 MASGWMKSLQCKSKAFEDVYHPNTKHLIPSASCRKSVQSIKDVVDTTKPKPKPKKQKPLQKHPSSRYPSTSTKPDFETTINRSRSTTTTTSRHAPTPDPRFPSLTELTEGHPSRNVVEIIFHTSWGPKPFSGRVEMIFKVHNGSRTVSRFEEYREAVKGRAGSASPTRGSNWEENARCVADGNEVMRFHCLGPTSGGGPYGGACAWSFPGSKGSAICTFSGSGGAHENSGGGKGRKAMLVCRVIAGRVSKQLGFMDSLLDGRVGFDSVSGDNGELLVFDSRAVLPCFLIIYKL. 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00451 293 MobiDBLite consensus disorder prediction 62 96 - -
Seca10g00451 293 MobiDBLite consensus disorder prediction 30 109 - -
Seca10g00451 293 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 291 - -
Seca10g00451 293 Gene3D - 102 292 - -
Seca10g00451 293 SUPERFAMILY ADP-ribosylation 103 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00451 Seca-Chr10 3931505 3932386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00451 103 292 C2H2 Transcription Factor Family AT5G54630 37.054 2.05e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00451 - - gmx:100804686 444.121