Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00450 ATGTCGGCTTACACAGACCAGGATCCCCGTCTTCATGGCATCAAAACTAAGATTCGTGTCGTCCCCAATTTCCCCAAATCCGGTATTATGTTCCAAGACATTACCACTCTTTTGCTCGATCCAAAAGCTTTCAAGGACACAATCGATTTGTTCGTTGAGCGCTACAAGGGCAAAAATATTTCTGTTGTTGCAGGAATTGAAGCGCGTGGCTTTATTTTTGGTCCTCCCATTGCACTGGCAATAGGAGCAAAGTTTGTACCATTGAGGAAACCAAAGAAGTTGCCTGGCAAAGTTATTTCTCAAGAATATATTCTGGAATATGGAAGGGACTGTCTTGAGATGCATGTTGGAGCTGTTGAAGCTGGTGAGCGGGCTATAGTGGTTGATGATTTGATTGCAACGGGTGGAACGCTCTGTGCAGCTATGGACTTACTAGGTAAGAAAATTCTATTATATAGACCATCATTTTATCAGAATATGACATTGTTTTACATGAAGGTGATCCAATATTAA 513 0.4152 MSAYTDQDPRLHGIKTKIRVVPNFPKSGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVEAGERAIVVDDLIATGGTLCAAMDLLGKKILLYRPSFYQNMTLFYMKVIQY. 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00450 170 Pfam Phosphoribosyl transferase domain 50 147 IPR000836 -
Seca10g00450 170 Hamap Adenine phosphoribosyltransferase [apt]. 14 170 IPR005764 GO:0003999|GO:0005737|GO:0006168
Seca10g00450 170 CDD PRTases_typeI 48 145 IPR000836 -
Seca10g00450 170 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5 146 - -
Seca10g00450 170 FunFam Adenine phosphoribosyltransferase 1 2 150 - -
Seca10g00450 170 SUPERFAMILY PRTase-like 12 145 IPR029057 -
Seca10g00450 170 Gene3D - 2 149 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00450 Seca-Chr10 3923873 3928425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00450 1 147 PRT Gene Family AT1G27450 76.190 4.86e-78 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00450 K00759 - gmx:100306411 281.952