Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00402 ATGGCTGTAGAGGAACACCAAGGGCATGACAACTTAATGACTTACATTGTTCATGTCCAAAAGCCAGAGGTTGGAGCTTCTCTTCAATCAGAAGAGTTGCATAGCTGGTACCACTCACTCCTTCCACAAACTTCCGAAACCTCCAACAAGGACCGAATGGTTTTCTCTTACCGCAACGTGGCCTCTGGATTTGCTGTAAAGTTGACCCCACAAGAGGCCAAAACCCTACAAGAAAAAGAGGAAGTTGTGTCAGCACGACCCGAAAGAACCCTTTCCTTACACACAACTCACACTCCAACCTTCTTGGGGCTACAACAGGGGCAAGGATTGTGGAACGTTTCAAATCTTGGCAAAGGCGTCATAATTGGAGTCATAGACACAGGCATATACCCTTTCCATCCATCCTTCAACGATGAAGGAATGCCACCTCCACCTGCTAAATGGAAAGGCCATTGTGAGTTCACTGGGGGCAGAACATGCAACAACAAACTCATTGGTGCAAGGAATTTGGTGAAAAGCGCAATTGAAGAGCCTCCTTTTGAAAATTTCTTCCACGGAACCCACACAACTGCAGAGGCAGCTGGAAGATTTGTAGAGGACGCTAGTGTTTTTGGCAATGCTAAGGGCACTGCAGCTGGCATGGCACCAGAAGCTCATGTTGCAATGTACAAAGTTTGCAACACCAAAGTGGGATGCCCTGAAAGTGCCATCTTAGCTGCAATGGATGTAGCCATTGAGGATGGTGTGGATGTTCTTTCTCTCTCCCTTGGCTTAGGCTCTCTTCCATTCTTTGAAGATCCAATTGCCATAGGTGCATTTTCTGCTATTCAAAGTGGAATTTTTGTCAGTTGCTCTGCTGCCAACTCTGGCCCTGCCTACAGCACTCTATCAAACGAGGCCCCCTGGATTCTCACAGTTGGTGCAAGCACCATTGATAGAAAAATAGCAGCATCAGCAAAGCTTGGAAATGGAGCAGAATTTGAAGGGGAAACACTCTTCCAACCAAAGGACTTTTCTCCACAATTGTTACCACTTGTTTACCCTGGTGGAAATGCCAATGTAAACCAATCCTCTGCAGCCTTTTGTGCCCCTGGATCCTTAAACAACCTTGATGTTATTGTTAAGGGAAAGGTGGTGTTGTGTGATGTAGGTGGAGGCGTTCCATCTGATGTGAAAGGACAAGAAGTTTTAGATGCAGGTGGTGTGGCTATGATTGTTGTCAACTCACCACCCTTAGGCTTTAGTACCTTTGCTGTTGCTCATGTTCTTCCTGCTGTGCATTTGAGTTATAATGCTGGCTTGGCTATCAAAGCTTACATAAACTCAACCTACAAACCCACAGCAACAGTGCTATTCAAAGGAACTGTAATTGGTGATTCACTTGCTCCTACAGTTGTTTCATTTTCTTCAAGGGGTCCAAGCCAGGAAAGCCCTGGCATTCTTAAACCTGACATCATTGGACCTGGAGTGAACATTCTAGCTGCATGGGCTGTGTCTGTAGACAACAAAATCCCAGCATATGATATTGTTTCAGGCCTTCCCATATTGGACCAAAGGCTTCTACCTGCTGACGTGTTTGCCACTGGTGCAGGACATGTTAACCCTCTCAGAGCAAATGATCCAGGGCTTGTTTATGATATCCAACCTGAGGATTACATTCCTTATTTGTGTGGTTTGGGTTACTCAGACAGAGAAATTTCAATTCTTGTGCAGAGGAGAGTGAGATGCTCCTATGTAAGAAGCATACCAGAAGCACAACTCAATTATCCCTCGTTTTCTATAATTTTGGGGTCTACCTCACAGTTGTACACCAGAACGTTGACAAATGTTGGACCTGCCAGATCAACTTACAAGGTGAAACTTGAGGTGCCTTTGGCTTTGGGTATGAGCGTGAACCCAAGTCAGATAACATTCACGGAGGTGAACCAGAAGATTACATACTCAGTGGAGTTTATCCCAGAAATCAAAGAAAATAGAGGCAACCATAGTTTCACTCAGGGCTCTCTCACGTGGGTATCGGACACTCACGCTGTTCATGTTAGAAAGCCTCAGCCTCAGGGTGATGCTAATTCTCTTCACTCTGAGAATTTGCATGGCTGGTACCATTCTCTCCTGCCAGCTAGCACAAAAACTCAGAACCAACAACGCATCATTTTCTCATACAAAAACATCTTGGATGGATTTGCTGTGAAATTGACCCCTGAAGAGGCCAAAGCTCTTGAAGACAAAGATGAGGTGGTGTCAGCCCGCCCTGAAAAGATCCTCTCTTTACACACAACTCACACTCCAAGTTTCTTGGGGTTGCAACAGGGACTTGGACTATGGAAAGGTTCCAATTTAGGGGAGGGAATAATAATTGGAATCTTGGACACAGGGATATACCCTTTCCATCCTTCCTTTTCTGATGAAGGAATGCCATCTCCACCATCAAAATGGAAAGGCCACTGTGAATTCACAGGGAGAAGAACTTGTAACAACAAGCTCATTGGCGCAAGAAATTTCGTCAAAACCACAAACAATCAATCCCTTCCATTCGATGATGTTGGTCATGGAACTCACACAGCCAGCACTGCCGCTGGAAGACCAGTTCAGGGTGCTAATGTCTATGGCAATGCTAAGGGAACAGCTTCTGGCATGGCACCTGATGCACACTTAGCAATTTACAAGGTTTGCAGCCTCTATGGTTGTTCTGAGAGTGCAATATTAGCTGGAATGGATGCTGCTGTTGATGATGGTGTTGATATACTCTCTCTCTCCCTTGGTGGACCCTCTGCTCCTTTCTTTGATGATCCAATTGCACTCGGTGCATTTGGTGCAATTCAGAAGGGAATTTTTGTTAGTTGCTCAGCTGCTAATGCTGGTCCCTTTTATGGTTCATTGTCTAATGAGGCTCCTTGGATTCTCACCGTTGGTGCCAGCACTATTGACAGAAAAATAATGGCAATAGCAAAGCTTGGCAATGGGAGAGAATATATTGGGGAATCAGTGTTCCAACCCAAGGACTTTGCACCCATGTTATTGCCACTTGTGTATGCTGGTGCAAATGGAACAAGTGGCTCTGTCTTTTGTGCTCCTGAATCCTTGGAGAATGTGGATGTTAAGGGAAAGGTAGTGTTGTGTGAGCAAGGTGGATTTGTTCCAAGAGTGGCCAAAGGGAAAGCTGTTAAGGATGCTGGTGGTGCTGCCATGATCCTCATGAACAGTAAGCTTGAAGCCTTCAATCCCATTGCTGATGTTCATGTTCTCCCTGCTGTGCATGTGAGTTATGCTGCTGGGTTAGCCATCAAAGATTACATAAATTCAACTATAGCACCAACAGCCACAATTTTGTTTGAAGGAACTGTTATTGGAAACCCACTTGCTCCTGCAGTTGCTTCCTTTTCTTCTAGAGGTCCAAGCCAAGCAAGTAGAGGAATTCTGAAACCAGACATAATTGGACCAGGAGTGAACATTCTAGCTGCATGGCCTGTGTCTTTGGACAATAACACCCCACCATTCAACATAATTTCAGGTACCTCAATGTCTTGTCCTCATCTCAGTGGCATTGCTGCTTTGTTGAAAAACTCCCATCCAGATTTGTCCCCTGCTGCCATAAAGTCAGCAATCATGACCACTGCTTATGGGGTGAATCTTGAAGGCAAGCCTATTTTGGACCAAACGCTTCAACCAGCAGATGTGTTTGCCATTGGTGCTGGACATGTCAACCCTTCAAAAGCAAATGATCCAGGGCTTATTTATGACATACAACCAAATGATTACATTCCTTATTTGTGTGGTTTGGGTTACACAGACAGACAAGTTGGAATTATTTTGCAACAGAAAGTGAGATGCTTGGAGGTAAAACCTATAGCAGAAGCACAACTCAATTATCCCTCATTTTCTATTCTGTTGGGGAACACTTCACAGTTCTACTCAAGAACACTGACAAATGTGGGACCAGTCAACACAACTTACTCTGTGGAAATTGATGTGCCTCTGGCTGTAGGTATGAGCATAAGCCCTGCTAGAATTACATTCACTGAGGTGAAGCAGAAGGTTACATACTATGTTGGGTTTATACCCGAAGACAGAGAGAATAGAGGAAATCACATGTTTGCTCAGGGAGCTATTAAGTGGGTATCTGAAAAATACACTGTCAGCATCCCTATATCTGTCATCTTCCGGTGA 4167 0.4476 MAVEEHQGHDNLMTYIVHVQKPEVGASLQSEELHSWYHSLLPQTSETSNKDRMVFSYRNVASGFAVKLTPQEAKTLQEKEEVVSARPERTLSLHTTHTPTFLGLQQGQGLWNVSNLGKGVIIGVIDTGIYPFHPSFNDEGMPPPPAKWKGHCEFTGGRTCNNKLIGARNLVKSAIEEPPFENFFHGTHTTAEAAGRFVEDASVFGNAKGTAAGMAPEAHVAMYKVCNTKVGCPESAILAAMDVAIEDGVDVLSLSLGLGSLPFFEDPIAIGAFSAIQSGIFVSCSAANSGPAYSTLSNEAPWILTVGASTIDRKIAASAKLGNGAEFEGETLFQPKDFSPQLLPLVYPGGNANVNQSSAAFCAPGSLNNLDVIVKGKVVLCDVGGGVPSDVKGQEVLDAGGVAMIVVNSPPLGFSTFAVAHVLPAVHLSYNAGLAIKAYINSTYKPTATVLFKGTVIGDSLAPTVVSFSSRGPSQESPGILKPDIIGPGVNILAAWAVSVDNKIPAYDIVSGLPILDQRLLPADVFATGAGHVNPLRANDPGLVYDIQPEDYIPYLCGLGYSDREISILVQRRVRCSYVRSIPEAQLNYPSFSIILGSTSQLYTRTLTNVGPARSTYKVKLEVPLALGMSVNPSQITFTEVNQKITYSVEFIPEIKENRGNHSFTQGSLTWVSDTHAVHVRKPQPQGDANSLHSENLHGWYHSLLPASTKTQNQQRIIFSYKNILDGFAVKLTPEEAKALEDKDEVVSARPEKILSLHTTHTPSFLGLQQGLGLWKGSNLGEGIIIGILDTGIYPFHPSFSDEGMPSPPSKWKGHCEFTGRRTCNNKLIGARNFVKTTNNQSLPFDDVGHGTHTASTAAGRPVQGANVYGNAKGTASGMAPDAHLAIYKVCSLYGCSESAILAGMDAAVDDGVDILSLSLGGPSAPFFDDPIALGAFGAIQKGIFVSCSAANAGPFYGSLSNEAPWILTVGASTIDRKIMAIAKLGNGREYIGESVFQPKDFAPMLLPLVYAGANGTSGSVFCAPESLENVDVKGKVVLCEQGGFVPRVAKGKAVKDAGGAAMILMNSKLEAFNPIADVHVLPAVHVSYAAGLAIKDYINSTIAPTATILFEGTVIGNPLAPAVASFSSRGPSQASRGILKPDIIGPGVNILAAWPVSLDNNTPPFNIISGTSMSCPHLSGIAALLKNSHPDLSPAAIKSAIMTTAYGVNLEGKPILDQTLQPADVFAIGAGHVNPSKANDPGLIYDIQPNDYIPYLCGLGYTDRQVGIILQQKVRCLEVKPIAEAQLNYPSFSILLGNTSQFYSRTLTNVGPVNTTYSVEIDVPLAVGMSISPARITFTEVKQKVTYYVGFIPEDRENRGNHMFAQGAIKWVSEKYTVSIPISVIFR. 1389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00402 1388 Pfam Subtilase family 117 504 IPR000209 GO:0006508|GO:0008236
Seca10g00402 1388 Gene3D - 1257 1387 - -
Seca10g00402 1388 Gene3D - 556 683 - -
Seca10g00402 1388 Gene3D Peptidase S8/S53 domain 783 1253 IPR036852 GO:0004252|GO:0006508
Seca10g00402 1388 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 786 797 IPR023827 -
Seca10g00402 1388 FunFam subtilisin-like protease SBT1.5 976 1116 - -
Seca10g00402 1388 CDD PA_subtilisin_like 320 450 - -
Seca10g00402 1388 Gene3D - 976 1116 - -
Seca10g00402 1388 Gene3D - 312 458 - -
Seca10g00402 1388 CDD Peptidases_S8_3 757 1207 IPR034197 -
Seca10g00402 1388 Pfam PA domain 1008 1095 IPR003137 -
Seca10g00402 1388 Pfam PA domain 344 436 IPR003137 -
Seca10g00402 1388 CDD Peptidases_S8_3 93 317 IPR034197 -
Seca10g00402 1388 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 122 133 IPR023827 -
Seca10g00402 1388 Gene3D Peptidase S8/S53 domain 119 512 IPR036852 GO:0004252|GO:0006508
Seca10g00402 1388 FunFam subtilisin-like protease SBT1.5 312 457 - -
Seca10g00402 1388 SUPERFAMILY Subtilisin-like 757 1244 IPR036852 GO:0004252|GO:0006508
Seca10g00402 1388 Pfam Peptidase inhibitor I9 693 758 IPR010259 -
Seca10g00402 1388 Pfam Peptidase inhibitor I9 14 94 IPR010259 -
Seca10g00402 1388 CDD PA_subtilisin_like 984 1109 - -
Seca10g00402 1388 ProSiteProfiles Serine proteases, subtilase domain profile. 765 1240 - -
Seca10g00402 1388 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 712 1385 IPR045051 -
Seca10g00402 1388 ProSiteProfiles Serine proteases, subtilase domain profile. 101 551 - -
Seca10g00402 1388 SUPERFAMILY PA domain 1008 1129 IPR046450 -
Seca10g00402 1388 Pfam Fibronectin type-III domain 1287 1385 IPR041469 -
Seca10g00402 1388 Pfam Fibronectin type-III domain 586 679 IPR041469 -
Seca10g00402 1388 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 94 IPR037045 -
Seca10g00402 1388 PRINTS Subtilisin serine protease family (S8) signature 846 859 IPR015500 -
Seca10g00402 1388 PRINTS Subtilisin serine protease family (S8) signature 1170 1186 IPR015500 -
Seca10g00402 1388 PRINTS Subtilisin serine protease family (S8) signature 781 800 IPR015500 -
Seca10g00402 1388 FunFam Subtilisin-like protease SBT1.5 783 1017 - -
Seca10g00402 1388 SUPERFAMILY Subtilisin-like 93 543 IPR036852 GO:0004252|GO:0006508
Seca10g00402 1388 Pfam Subtilase family 781 1214 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00402 Seca-Chr10 3502909 3508747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00402 14 683 Subtilisin-like Serine Gene Family AT1G04110 39.894 2.55e-156 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00402 - - fve:101291925 1534.62