Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00366 ATGTTGGCTCTATGTCTTGGAGCATTGATTATTATAGGCATTACACATTGGGTTTATAGATGGAGAAATCCCAGCTGCAATGGAAAACTCCCACCAGGTTCAATGGGCTTGCCTCTTCTGGGTGAGACCCTTCAGTTCTTCTCCCCCAACACCACTTCTGATATTTCTCCATTCATCAAGCAGAGAATGAAAAGGTATGGATCAATCTTCAAGACCAACTTGGGTAGGAAAAGGGCAATGAAGATGCTGAAGAACATGCTGCAGGAAAGACGGGAAAAGCCTAGGAAACAGCAGACGGATTTCTTTGACTATGTTATTGAAGAACTTAGGAAAGAGGGAACAATACTCACTGAAGCGATCGCTCTGGACCTCATGTTTGTGCTCCTCTTTGCAAGCTTTGAAACCACTTCTCTCGCACTGACTTATGCCATGAAATTACTCTCTGACCATCCCTTGGTGCTCAAGCAATTACAAGAAGAACATGAAGCCATCCTAAAACGACGTGAAGATCCTAACTCTGGAGTCACGTGGCAAGAATACAAATCTATGACATTTACATTTCAGTTCATAACTGAAACCGTGAGACTCGCAAATATAGTTCCAGGAATCTTCCGAAAGGCACTAAGGGAAATTAATTTCAAGGGATATACCATACCAGCAGGGTGGGCAGTCATGGTGTGTCCCCCAGCTGTACACTTGAACCCAGCGAAATATCAGGATCCTCTTGCCTTCAACCCATGGAGATGGGAGGGAGTGGAACTGAATGGTGCCAGCAAGCATTTCATGGCTTTCGGTGGAGGCATGAGATTTTGTGTTGGGACAGACTTTACTAAGGTTCAGATGGCTGTTTTTCTTCATAGCTTGGTAACAAAGTACAGGTGGCAACCTATCAAAGGAGGGAATATCATTCGAACTCCTGGTTTACAATTTCCAAATGGCTTTCACGTTCAGATCATGGAGAAAGATCAAAGGAAGCTGGAATCAGAATAA 990 0.4384 MLALCLGALIIIGITHWVYRWRNPSCNGKLPPGSMGLPLLGETLQFFSPNTTSDISPFIKQRMKRYGSIFKTNLGRKRAMKMLKNMLQERREKPRKQQTDFFDYVIEELRKEGTILTEAIALDLMFVLLFASFETTSLALTYAMKLLSDHPLVLKQLQEEHEAILKRREDPNSGVTWQEYKSMTFTFQFITETVRLANIVPGIFRKALREINFKGYTIPAGWAVMVCPPAVHLNPAKYQDPLAFNPWRWEGVELNGASKHFMAFGGGMRFCVGTDFTKVQMAVFLHSLVTKYRWQPIKGGNIIRTPGLQFPNGFHVQIMEKDQRKLESE. 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00366 329 Pfam Cytochrome P450 77 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00366 329 SUPERFAMILY Cytochrome P450 24 78 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00366 329 Gene3D Cytochrome P450 22 78 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00366 329 Gene3D Cytochrome P450 79 325 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00366 329 PANTHER CYTOCHROME P450 26 29 75 - -
Seca10g00366 329 PRINTS P450 superfamily signature 262 271 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00366 329 PRINTS P450 superfamily signature 188 199 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00366 329 PRINTS P450 superfamily signature 131 148 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00366 329 PRINTS P450 superfamily signature 271 282 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00366 329 PRINTS B-class P450 signature 262 271 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00366 329 PRINTS B-class P450 signature 233 248 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00366 329 PRINTS B-class P450 signature 205 232 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00366 329 PRINTS B-class P450 signature 271 282 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00366 329 SUPERFAMILY Cytochrome P450 76 319 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00366 329 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 264 273 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00366 Seca-Chr10 3232663 3236029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00366 8 74 Cytochrome P450 AT1G12740 74.627 1.60e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00366 - - gmx:100794607 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g00366 10 3232663 3236029 Seca10g00366 10 3232663 3236029 ECH