Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g00341 | ATGACATTTCACTTCTCTGATCTTGAAATTGCCTATGAGTTTTACAATTGGTATGGACGGATGAAAGGATTCTCTGCTCGCAAAAGCAAAGTGAGAAAAAACAAGAATAAAGTAATAGTGGAGAAGACTTTTCTTTGTCATAGGGAAGGCTTTAGGGAAAAAAAAAGATGA | 171 | 0.3509 | MTFHFSDLEIAYEFYNWYGRMKGFSARKSKVRKNKNKVIVEKTFLCHREGFREKKR. | 57 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g00341 | 56 | Pfam | FAR1 DNA-binding domain | 13 | 55 | IPR004330 | - | |
Seca10g00341 | 56 | PANTHER | FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED | 5 | 56 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g00341 | Seca-Chr10 | 3002384 | 3002554 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | FAR1 | Seca10g00341 | FAR1 | 4.7e-09 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g00341 | - | K17604 | mtr:11441999 | 75.8701 |