Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00341 ATGACATTTCACTTCTCTGATCTTGAAATTGCCTATGAGTTTTACAATTGGTATGGACGGATGAAAGGATTCTCTGCTCGCAAAAGCAAAGTGAGAAAAAACAAGAATAAAGTAATAGTGGAGAAGACTTTTCTTTGTCATAGGGAAGGCTTTAGGGAAAAAAAAAGATGA 171 0.3509 MTFHFSDLEIAYEFYNWYGRMKGFSARKSKVRKNKNKVIVEKTFLCHREGFREKKR. 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00341 56 Pfam FAR1 DNA-binding domain 13 55 IPR004330 -
Seca10g00341 56 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00341 Seca-Chr10 3002384 3002554 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g00341 FAR1 4.7e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00341 - K17604 mtr:11441999 75.8701