Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00328 ATGTCTTCTGATCTTTATACTTTTGATATTTCTTTCTACAAACATTCAAGCCCAGACTTTGCCTCCTATGAGTATGATGGAAATGGAGACCTTCTCTTTTTCTCTGATCCTTACCCTTTCCCTATTCTCACAGCCTCTCCTCCCATTGAAGGGAATTTGCTAATTAACAATTCTCCTGACACGTTTTCCTCTTCTTTCTTTTCTTTTTCTCCTCCAAGTACTCATCTGGAAAACCATAACCTCTATCAGCAGGCTAACACTACTATCCAGCCTCTGACAAATGTAAAAACCGAGTTTGGAAATTTCTCTGCTGCTTTGGATGAGTCTGGAGTGAAAAGCGACGAGGAATGCCAAATAGGTGTGGATTATACCTACAATTACAATCACCACTTTGTTCCTGAAAATGCATCAAAGTTGATGCACAGGAGCTACAGCTGTAACTCTTTTGATGGGAAGCCTGATACTTCCCCCTTTGAAGCTCACCTTGCAGACACCACTCTCATGGACTCCCCAAATTTTCAATGGCATGCCCCTCAAAACAGTTTCCTCAATGCAGAAATGAGGAGGGTGTGCAGTGCAGGAGACTTGCAGAACATGAAAGCAACACATACGTCTCATCAAACAGAGAGTCCTTTATCGGAGGAAGTAAACTTCAAAGTAGGGCGTTATAGTGCCGAAGAAAGAAAAGAAAAAATTTCTAAATACAGAGCCAAGAGAAGTCAGAGGAAGTTCAACAAGATTATTAAGTATGCATGCCGAAAGACACTAGCCGACAATCGAACACGCATACGTGGCAGATTCGCGCGTAACGACGAAACCAGCGAGATACCGAAAGCGCCATGTTCAACCACAGAAGAATACGAAGACGAGTTCTGGGTTGAGTTCATTGAAGGGCTCAGCTAG 903 0.4286 MSSDLYTFDISFYKHSSPDFASYEYDGNGDLLFFSDPYPFPILTASPPIEGNLLINNSPDTFSSSFFSFSPPSTHLENHNLYQQANTTIQPLTNVKTEFGNFSAALDESGVKSDEECQIGVDYTYNYNHHFVPENASKLMHRSYSCNSFDGKPDTSPFEAHLADTTLMDSPNFQWHAPQNSFLNAEMRRVCSAGDLQNMKATHTSHQTESPLSEEVNFKVGRYSAEERKEKISKYRAKRSQRKFNKIIKYACRKTLADNRTRIRGRFARNDETSEIPKAPCSTTEEYEDEFWVEFIEGLS. 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00328 300 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 118 279 IPR045281 GO:0009909
Seca10g00328 300 Pfam CCT motif 228 270 IPR010402 GO:0005515
Seca10g00328 300 ProSiteProfiles CCT domain profile. 228 270 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00328 Seca-Chr10 2892508 2894089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00328 224 275 C2C2-CO-like Transcription Factor Family AT5G24930 48.077 6.81e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca10g00328 CCT 1.2e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00328 - - gmx:100786853 341.273