Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca10g00327 | ATGGGATTTCCAGTGGGGTATACAGAGCTTATGTTGCCAAAGGTGTTTGTGCAGCTGCTTTCCGTATTGGGTTTCATCAGGAAATTGGTGACCATCCTGTTGTGCTATCTGGGTCTGGAACCCGACGACATTGCCTGGCCGGAGAGGATGCCGGAATTCGAATCGGTGTCAGCTCTTCTGATGGGGGAAATCCTGCCGGTGGTGAAGTTCTCGGAGGTGGAGATGGTGGACCCTCAGGAGAGGTGCGCCGTGTGCCTGTACGACTTCGAGGCAGAGGACGAGATCAGAAGGCTCACAAACTGCCGCCACATATTCCACAGGGGATGTCTGGACCGTTGGATGGGATATGATCGGAGAACGTGCCCGTTGTGCCGGACACCCTTCATACCCCATCATATGCAAGATACTTTCAATGAAATTGACACACTCTGGGAAGCTTCTGGAATCCCTGATTTTTATGATGATCATCCTTCTACCATCACGCCTTTCTAG | 492 | 0.5183 | MGFPVGYTELMLPKVFVQLLSVLGFIRKLVTILLCYLGLEPDDIAWPERMPEFESVSALLMGEILPVVKFSEVEMVDPQERCAVCLYDFEAEDEIRRLTNCRHIFHRGCLDRWMGYDRRTCPLCRTPFIPHHMQDTFNEIDTLWEASGIPDFYDDHPSTITPF. | 164 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca10g00327 | 163 | SMART | ring_2 | 82 | 124 | IPR001841 | - | |
Seca10g00327 | 163 | SUPERFAMILY | RING/U-box | 81 | 131 | - | - | |
Seca10g00327 | 163 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 60 | 130 | IPR013083 | - | |
Seca10g00327 | 163 | Pfam | Ring finger domain | 81 | 125 | IPR001841 | - | |
Seca10g00327 | 163 | ProSiteProfiles | Zinc finger RING-type profile. | 82 | 125 | IPR001841 | - | |
Seca10g00327 | 163 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 23 | 133 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca10g00327 | Seca-Chr10 | 2884140 | 2884631 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca10g00327 | 1 | 148 | C3H Transcription Factor Family | AT1G63840 | 57.325 | 1.04e-56 | 173 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca10g00327 | K16281 | - | gmx:102665617 | 257.299 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Seca10g00327 | 10 | 2884140 | 2884631 | Seca10g00327 | 10 | 2884140 | 2884631 | ECH | |
Seca10g00327 | 10 | 2884140 | 2884631 | Seca10g00327 | 10 | 2884140 | 2884631 | PCT |