Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00320 ATGGGTAGCAAAAGCAAAGAGAAAGAGGAAAATCAAATAAAGAGGGTTTTGACTCACGGAGGAAGATACGTGCAATACAATGTGTACGGAACCTTGTTTGAGGTCTCTTCCAAATATGTTCCTCCCATTCGCCCTATCGGTAGAGGCGCTTATGGCTTTGTCTGGTTAGTATGCATTCCTTTCTTTTTCTTTCTCACTCTCTCTCGTTGTTCCCTCAACTCTGGCTTTCTTTTCAGTTCTGCTGTTAATTCAGATACGCACGAAGAAGTTGCCATCAAGAAGATTGGTAACGCATTTGACAACATTATTGATGCTAAAAGGACTCTTAGGGAAATTAAACTGCTTCGCCACTTGGACCATGAAAATATTATTGCTATTAAAGATATAATACGACCTCCCAGAAAGGATGCCTTTAATGATGTTTACATTGTTTATGAATTGATGGACACTGATCTTCATCAGATAATTCGTTCTGACCAGCCTCTCAATGATGACCATTGTCAGTACTTTTTATACCAGCTGTTACGGGGGTTAAAATATGTGCATTCAGCTAATATCTTGCACCGTGATCTTAAGCCCAGCAATTTACTTCTGAATGGCAATTGCGACCTTAAAATTGGGGACTTTGGTTTGGCAAGGACGACATCTGAAACGGATTTCATGACGGAGTATGTTGTCACCCGATGGTACCGAGCCCCTGAATTGCTCCTTAATTGTTCAGAGTACACCTCTGCAATTGATGTTTGGTCTGTTGGTTGCATATTTGGTGAAATTATGACCAGAGAACCCTTGTTTCCTGGGAAAGATTATGTTCATCAGCTAAGGCTTATAACAGAGTTAATAGGTTCACCTGATGACGCCAGCCTAGGATTTCTCCGAAGTGAAAATGCCCGAAGATATGTTAGACAGATTCCACAATACAGGAAGCAAAAATTCTCAGCAAGATTCCCTAATATGTCGCCTGAGGCTCTGGATCTACTAGAAAAGATGCTTATCTTTGATCCCAACAAACGTATTACAGGTATACTAGAAAAAATTATTTTCTTTGCTTTTTTTTTTTTTTTTTTGGCAGTTGATGAGGCCCTATGTCACCCATATCTTTCATCTCTTCATGACATCAATGATGAGCCAGTTGGTCCCAGGCCATTCAGTTTTGATTTTGAGCAGCCAACATGCACTGAAGAGCACATCAAGGAGCTCATCTGGAGGGAATCAGTGAAGTTCAATCCAGATCCTCCCTGTCAGTGA 1248 0.4071 MGSKSKEKEENQIKRVLTHGGRYVQYNVYGTLFEVSSKYVPPIRPIGRGAYGFVWLVCIPFFFFLTLSRCSLNSGFLFSSAVNSDTHEEVAIKKIGNAFDNIIDAKRTLREIKLLRHLDHENIIAIKDIIRPPRKDAFNDVYIVYELMDTDLHQIIRSDQPLNDDHCQYFLYQLLRGLKYVHSANILHRDLKPSNLLLNGNCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSENARRYVRQIPQYRKQKFSARFPNMSPEALDLLEKMLIFDPNKRITGILEKIIFFAFFFFFLAVDEALCHPYLSSLHDINDEPVGPRPFSFDFEQPTCTEEHIKELIWRESVKFNPDPPCQ. 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00320 415 ProSitePatterns MAP kinase signature. 99 202 IPR003527 GO:0004707|GO:0005524|GO:0006468
Seca10g00320 415 SMART serkin_6 40 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00320 415 FunFam Mitogen-activated protein kinase 72 158 - -
Seca10g00320 415 SUPERFAMILY Protein kinase-like (PK-like) 43 374 IPR011009 -
Seca10g00320 415 Gene3D Transferase(Phosphotransferase) domain 1 148 394 - -
Seca10g00320 415 CDD STKc_TEY_MAPK 33 410 - -
Seca10g00320 415 Pfam Protein kinase domain 80 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00320 415 ProSiteProfiles Protein kinase domain profile. 40 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g00320 415 FunFam Mitogen-activated protein kinase 148 394 - -
Seca10g00320 415 Gene3D Phosphorylase Kinase; domain 1 78 404 - -
Seca10g00320 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Seca10g00320 415 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00320 Seca-Chr10 2793577 2796381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00320 9 410 MAP Kinase Gene Family AT4G01370 74.876 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Seca10g00320 Pkinase 8.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00320 - - gmx:100803024 692.575