Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00319 ATGATCATTCCAGAGAAGAACCGCAGAGAGATCTGCAAATACCTCTTCCAAGAGGGAGTTTGCTATGCGAAAAAGGATTATAATCTGGCAAAGCACCCGGAGATCGATGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGCTTCAAGTCAAGGGAGTACGTGAGGGAAACCTTCGCTTGGATGCATTATTACTGGTTCCTGACCAACGATGGCATTGAATTCCTCAGGACTTACCTCAATCTTCCATCCGAAATCGTGCCAGCAACTCTGAAGAAGCAAGCCAAGCCCGCTGGCAGATCATTCGGTGGCCCACCCGGTGATCGCCCTAGGGGCCCACCTCGCTTCGACGGAGAGAGGAGATTTGGTGATCGTGATGGATACCGTGGAGGTCCCAGGGGACCTGGTGGCGACTTTGGAGACAAGGGTGGAGCTCCTGCTGACTACCGGCCTTCTTTCGGGGTAATCTTATTGCACCATGGTTTAATGTGA 492 0.5183 MIIPEKNRREICKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRSFGGPPGDRPRGPPRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGVILLHHGLM. 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00319 163 MobiDBLite consensus disorder prediction 112 128 - -
Seca10g00319 163 PANTHER 40S RIBOSOMAL PROTEIN S10 1 154 IPR037447 -
Seca10g00319 163 Gene3D - 1 103 IPR036388 -
Seca10g00319 163 Pfam Plectin/S10 domain 3 94 IPR005326 -
Seca10g00319 163 MobiDBLite consensus disorder prediction 93 145 - -
Seca10g00319 163 FunFam 40S ribosomal protein S10 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00319 Seca-Chr10 2784506 2788613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00319 1 153 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 81.169 1.14e-76 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00319 K02947 K09422 csv:101214080 224.557