Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00315 ATGGAGTGGGATTTGCGAGCTGCTACTGTGGGATGCAGCAGTGAAGCTGCACATCTTAGTTTTTCTTCTGTACAGGATGATCGCCTTCTTTGCAATTTTCAGGAATTCTCAGAAACCACAACGGTTGTTGATGAATTGGAAGAGCTTTACAAACCTTTCTACCCCGATCCTGTTTCAACTTCCCAACCTGTCCCTGAAGAAGTCAAACCATCAGCTGTATTACAAGATCCAGCATCATCTAAATGCAAAAGAAGCAAGAAGAATGAGAAAAGGATGAAGAGGGTTGAGCGTGTGAGAGGAGATGGCGTTAGTGACCCATGGGCGTGGCGTAAATATGGGCAGAAACCAATAAAGGGATCACCCTATCCACGTAGCTACTATAGGTGCAGTAGCTCCAAAGGATGTTCGGCAAGGAAACAGGTGGAAAGGAGCCACACGGATCCTCAAGTTTTCATAGTTACCTACACCGCAGAACACACCCATCCTCCTCACCCTCACCCTCGTCGCAGCAAAAACACAACAACTCATGATCCTCCTGCAGTGGCGGATGTACCAAATATTAATACTGTTGAACTTGAACAAAGGAAAATAGAGAGCAGGGAAGATGATGATTGGTTTCCAAGCATGGAGCTAGAGGAAGTAAACGGCTTCATGGATACTACTTTTGCGGACACTTGGTTCGCCGATCAATGTAATTAA 699 0.4549 MEWDLRAATVGCSSEAAHLSFSSVQDDRLLCNFQEFSETTTVVDELEELYKPFYPDPVSTSQPVPEEVKPSAVLQDPASSKCKRSKKNEKRMKRVERVRGDGVSDPWAWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSHTDPQVFIVTYTAEHTHPPHPHPRRSKNTTTHDPPAVADVPNINTVELEQRKIESREDDDWFPSMELEEVNGFMDTTFADTWFADQCN. 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00315 232 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 20 183 IPR044810 GO:0003700
Seca10g00315 232 SMART WRKY_cls 103 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca10g00315 232 ProSiteProfiles WRKY domain profile. 98 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca10g00315 232 MobiDBLite consensus disorder prediction 159 187 - -
Seca10g00315 232 Pfam WRKY DNA -binding domain 105 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca10g00315 232 SUPERFAMILY WRKY DNA-binding domain 101 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca10g00315 232 Gene3D WRKY domain 85 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca10g00315 232 MobiDBLite consensus disorder prediction 57 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00315 Seca-Chr10 2750001 2751383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00315 2 178 WRKY Transcription Factor Family AT4G01250 41.206 6.95e-40 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca10g00315 WRKY 1.4e-26 CL0274