Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00295 ATGGCTTCCAATGCTACATCTGGAAATGTTTGCACGCCGCCAATGAAACCCACATCAAATGGTGCATTTCAGGGAGATAACCCTCTTGATTATGCACTTCCCCTGGCTATTTTACAGATATGCCTCGTTCTTGTGGTCACAAGGGGGCTGGCATACCTTCTAAGACCTTTAAGGCAACCGCGAGTTATTGCAGAGATTATTGGAGGAATAATACTTGGGCCATCTGCACTTGGACGGAATAAAAGCTATCTGCATGCAGTTTTCCCACCCAAGAGTCTTACAGTACTGGATACTCTAGCAAACCTAGGCATTATATTCTTTCTATTCCTAGCAGGCCTAGAGTTAGATCCTAAATCTCTGCGGCAAACTGGAGGTAAAGTCCTTGGCATTGCTATGGCTGGAATAAGCTTACCCTTTGTACTTGGAATTGGTTCATCATTGATTCTGCAAGGAACAATCGCCAAAGGTGTAGATAGCACTGCATTTCTTGTATATATGGGTGTTGCTCTGTCCATAACTGCATTCCCTGTATTAGCCCGCATTTTGGCTGAGTTGAAACTTCTAACCACTAATGTTGGCAGAATGGCTATGTCAGCTGCAGCAGTTAATGATATAGCTGCATGGATTTTGCTTGCTCTGGCTGTTGCCTTATCAGGCAATAACCAATCTCCAATTGTGTCATTGTGGGTCTTCTTGTGTGGGTGTGGTTTTGTACTGTGTTCAGTCTTCATTCTCCTTCCAATTTTCAAATGGATGGCACAGCGATGCCATGAAGGGGAGCCAGTTGAAGAGGTATATATATGTGCTACGTTAGGTGCTGTTCTGGCTGCTGGGTTCGTTACAGATTCTATTGGAATCCATGCCATGTTTGGCGCTTTTGTTGTTGGAGTTTTGGTCCCAAAAGATGGACCATTTGCCAGTGCTCTTGTGGAGAAAGTAGAGGATCTTGTGTCTGGTCTGTTGCTCCCACTCTATTTTGTGTCAAGTGGATTGAAGACTGATATAGCCACCATCCAGGGGCTCCAATCATGGGGTCTTCTGGCTTTCGTTATATTTACTGCTTGTTTTGGGAAGATTGTTGGGACAATTGTAGTATCTCTTCTCTGTAAAGTCCCATTCAATGAGGCTCTAGTGCTGGGATTCTTGATGAATACTAAAGGCTTGGTTGAATTGATTGTCCTCAACATCGGTAAAGATAGAAAGGTTTTGAATGATCAGACCTTTGCCATTATGGTTCTCATGGCTCTCTTTACCACCTTCATTACCACTCCTCTCGTGACTGCTGTGTATAAGCCAGCAAGGAAGGCAAGAATAGCAGTGTACAAATACAGAACAATTGAAAGGAAAAACACAAATAGCCAACTAAGGATTCTTGCTTGCTTCCACGGTGCAAGGAATATTCCATCAGTGATAAATTTGATTGAGGCTTCAAGAGGAATCCAGAAGCGTGATGCACTGTGTGTGTATGCAATGCACCTTAAAGAACTCTCTGAGAGATCCTCATCTATACTAATGGTACATAAGGCAAGAAAAAATGGGTTGCCATTCTGGAACAAAGGTCATCATGCAGATTCAAACCATGTTATCGTGGCATTTGAGGCTTACCAGCAACTAAGCCATGTCTCTGTCCGACCAATGATAGCAATCTCATCTATGGCTAACATTCATGAAGACATATGTGCAACTGCTGAGAGAAAGAGAGCTGCAATAATTATTCTTCCATTTCATAAGCATCAAAGATTAGATGGTTCACTAGATATTACCCGAAATGATTTTAGATTTGTTAACAAAAGGGTACTTGAACATGCACCATGCTCAGTTGGAATTTTTATTGATCGTGGGCTTGGTGGTACATGCCATGTATCTGCAAGTAATGTCTCCTATTGCATTACTGTGCTTTTCTTTGGTGGTGGTGATGACCGTGAAGCCCTTGCTTATGGAGGTCGAATGGCGGAGCACCCTGGCATAAGATTAGTGGTTATTCGCTTTGCAGTGGAACCTAGAATTGCAGGGGAGATCACCAGAGTTGACATGGGAGAATCATCTAGCACCAAATCAATCTCACATGATGAGGAGTTTCTTGCAGAATTTAAGGTGAAAATAGCCAATGATGACTCCATCATCTATGAAGAGAAGGTAGTAAAAAATGTTGCAGAAACAGTTGCTACTATTGGTGAGTTTAGTTGCTGTAATCTGTTTCTTGTGGGTCGAAGGCCTGCTAGTGAAATGGCATGTGCTATGAAAAGAAGTGAGTGTCCGGAGCTAGGACCTGTTGGTGGTTTGTTGGCATCACAAGATTGCCCCACAACAGCTTCGGTGTTGGTGATGCAACAGTACCGCGATGGGGATGGGGTGCCAATAAATTTTGTATCAGAAACGGAGGAACATCTAGCAAATGGAGATGAAGAATCTGCTTGA 2418 0.4305 MASNATSGNVCTPPMKPTSNGAFQGDNPLDYALPLAILQICLVLVVTRGLAYLLRPLRQPRVIAEIIGGIILGPSALGRNKSYLHAVFPPKSLTVLDTLANLGIIFFLFLAGLELDPKSLRQTGGKVLGIAMAGISLPFVLGIGSSLILQGTIAKGVDSTAFLVYMGVALSITAFPVLARILAELKLLTTNVGRMAMSAAAVNDIAAWILLALAVALSGNNQSPIVSLWVFLCGCGFVLCSVFILLPIFKWMAQRCHEGEPVEEVYICATLGAVLAAGFVTDSIGIHAMFGAFVVGVLVPKDGPFASALVEKVEDLVSGLLLPLYFVSSGLKTDIATIQGLQSWGLLAFVIFTACFGKIVGTIVVSLLCKVPFNEALVLGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPLVTAVYKPARKARIAVYKYRTIERKNTNSQLRILACFHGARNIPSVINLIEASRGIQKRDALCVYAMHLKELSERSSSILMVHKARKNGLPFWNKGHHADSNHVIVAFEAYQQLSHVSVRPMIAISSMANIHEDICATAERKRAAIIILPFHKHQRLDGSLDITRNDFRFVNKRVLEHAPCSVGIFIDRGLGGTCHVSASNVSYCITVLFFGGGDDREALAYGGRMAEHPGIRLVVIRFAVEPRIAGEITRVDMGESSSTKSISHDEEFLAEFKVKIANDDSIIYEEKVVKNVAETVATIGEFSCCNLFLVGRRPASEMACAMKRSECPELGPVGGLLASQDCPTTASVLVMQQYRDGDGVPINFVSETEEHLANGDEESA. 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00295 805 FunFam Cation/H(+) antiporter 15 35 437 - -
Seca10g00295 805 Gene3D - 35 440 IPR038770 -
Seca10g00295 805 PANTHER CATION/H + ANTIPORTER 10 780 - -
Seca10g00295 805 Pfam Sodium/hydrogen exchanger family 42 427 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca10g00295 805 Coils Coil 790 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00295 Seca-Chr10 2569174 2573190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00295 1 804 Antiporter Super Family AT5G41610 69.089 0.0 1102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00295 K26731 - gmx:100810155 1332.01