Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00292 ATGCAGTTGAATGCTTCTCGGATAAAAGTTCTTCAAGCTCAAGATGATGTGGTGAATAAAATGAAAGAAGCTGCATCGAAGGATCTTTTGAATGTGAGCCGTGATCATCACGTGTACAAAATCCTTTTAAAAGATCTCATTGTTCAGGGTTTGCTGAGGCTGAAAGAGCCTTCTGTCTTATTGCGATGTCGGGAAGATGACCTGCATTTGGTAGAGGATGTGTTGGATTCAGCTGCACGGGAGTATGCTGAAAAGGCAAATAGTCATCCACCAGAGATCATTGTTGACAACAAAGTCTATCTTCCACCTGCCCCCAGCCATCATAATTCCCATGAATCCTACTGCTCTGGAGGGGTGGTGTTGGCTTCTCGAGATGGAAAGATTGTGTGTGAAAATACGCTTGATGCGCGTTTGGATGTAGTGTTTCGTAAAAAACTTCCAGAGATCCGCAAGCAGCTCTTCGGACAAGTTGCTGTTTGA 480 0.4417 MQLNASRIKVLQAQDDVVNKMKEAASKDLLNVSRDHHVYKILLKDLIVQGLLRLKEPSVLLRCREDDLHLVEDVLDSAAREYAEKANSHPPEIIVDNKVYLPPAPSHHNSHESYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQVAV. 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00292 159 Gene3D - 21 158 IPR038495 -
Seca10g00292 159 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 156 IPR002842 GO:0033178|GO:0046961|GO:1902600
Seca10g00292 159 Pfam ATP synthase (E/31 kDa) subunit 2 154 IPR002842 GO:0033178|GO:0046961|GO:1902600
Seca10g00292 159 SUPERFAMILY V-type ATPase subunit E-like 16 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00292 Seca-Chr10 2523952 2527738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00292 1 158 Primary Pumps ATPases(2) AT4G11150 75.316 6.35e-82 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00292 K02150 - rcu:8287721 267.314