Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00274 ATGGAAAATGACACAAGTTGGGAGCAGAAGGCACTCATCAATGAGCTAACTCAGGGGATGGAGACAGCAAGAAAGTTGAAGGCAGACTTGACGTTACCCTCTTCTGTTGACGCAAGGGACTTGCTGGTGCAGAAGATATTATCTTCTTATGACAAGGCTTTACTAATTCTAAGATGGAATGCTTCAATTTCCATGTCAATTCAAACTTCCTCACCAGAGTCCCCAGTATCCTTCAACAGAGTGGGCCTGAAGAATCATCAGAAGCTTAAACAAGACTCAAAGAAAAGAAAGATGATGCCCAAATGGATGGATCAAGTTAAAGTGAAGATAGAGAATGGCATTGAAGGACCCTACGAAGATGGCTACAGCTGGAGAAAATATGGACAGAAAGATATTCTGGGTGCAAAATATCCAAGAAACTATTATAGATGCACCTTCCGGAACACAAAGGGCTGCATGGCCACGAAGCAGTTACAGAGATCAGATAAAGATCCCACTATTTTGGACATAACTTACAGAGGAAGCCACACCTGTTCTCAAAGAAACGATGCCGTTTTGCCGCCAAAGTCACCAGACACGCAAGAGAAACCGCATGCACAAGAAAGCCTTACAAAGTTAAAAAACACTTTGACTGTCATTACGGAAAACTTGGGAAATGAAGAAACGGGATATGCTTTCACTTCATTAGAATGCATGGCACAAGATAACCACACCTTATTTCCTTCTATCTTGCAGGAGAATGATGATCCCTTTTTGAGTAGCATTTCCCAAACGCACTTGTTATCTCCAGAAACACCAGAATCTAAATATTATCTATCTCTGGATGAGTTGGATGGTGTCCCTACAAAGCCAGGCCCAGCAGGTTCTGACATCATTTCCGCCGACACATGGGCTTCCAATTCTCCAGTTTTCGATTTCAATTTCACACTCGATTCAGTGAACATTGATCCAAATTTCCCTTTCAATACCTCGGGATTTTTGTCCTAA 987 0.4215 MENDTSWEQKALINELTQGMETARKLKADLTLPSSVDARDLLVQKILSSYDKALLILRWNASISMSIQTSSPESPVSFNRVGLKNHQKLKQDSKKRKMMPKWMDQVKVKIENGIEGPYEDGYSWRKYGQKDILGAKYPRNYYRCTFRNTKGCMATKQLQRSDKDPTILDITYRGSHTCSQRNDAVLPPKSPDTQEKPHAQESLTKLKNTLTVITENLGNEETGYAFTSLECMAQDNHTLFPSILQENDDPFLSSISQTHLLSPETPESKYYLSLDELDGVPTKPGPAGSDIISADTWASNSPVFDFNFTLDSVNIDPNFPFNTSGFLS. 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00274 328 Gene3D WRKY domain 104 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca10g00274 328 SUPERFAMILY WRKY DNA-binding domain 117 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca10g00274 328 SMART WRKY_cls 118 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca10g00274 328 Pfam WRKY DNA -binding domain 119 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca10g00274 328 ProSiteProfiles WRKY domain profile. 119 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca10g00274 328 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 203 IPR044810 GO:0003700
Seca10g00274 328 MobiDBLite consensus disorder prediction 179 200 - -
Seca10g00274 328 FunFam WRKY transcription factor 53 104 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00274 Seca-Chr10 2364590 2366508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00274 6 320 WRKY Transcription Factor Family AT4G11070 36.278 5.06e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca10g00274 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00274 - - gmx:100815760 401.364