LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca10g00258	ATGGCTACCTTGGCCCAATTCTATTTATTGTTGTTGATCTTTCTTTTCCCTCTAAAAAATACAAGAGGGGAACTAATTTGCGCTAGCATCTCATGCGGTGAAATTGATATTCATTTTCCTTTCAGTTTGAATGGTGCAAATCAAAGTCATCAGTGTAGCTACCCAAGATTTCAACTTTCCTGCGACAACCATGGCCGAACCATTCTCACCCTCTCAGGTTCCGGGGATTTGGTCGTTAAAGGCATCAATTACGAGGATCAAACCATTCAGGTAAACGACCCTAATGGGTGCCTTGCAAAACGTTTCTTGCAGAACAACTTGAGCCATTCTGTGTCTCCACCATTCATGTTTGATGCAAGCGTTTATGAGCTTTATGATCTGACATTCCTTCGTTGCCCCTCCAACATAACCGAGTCATATCCACTGCCACCAATTTCTTGCCTGAGCAGCGTTAACTACTCTACGGTCATATTTTCATGGTGGTCACCAAGTGACTCATCATCACCTTCGCATAAGTGTGAGGTGATATCCTCAGCCACTGTTCCCATTCCAAATCCAAACATGGCCACATCACTCTTCTCCCCTGATCTTAGCCATGATATTCAGTTGAAGTGGAAAAAGCCCGAATGCGGGGATTGTGAAGCTCGTGGCCAAGTTTGTGGGTTCACGGATCCCAGAACTCTTCAAGTTGGATGCTTCTCCAGCCCAAACCAAGCCCAAGGGTTTGTCAAGAAGTGCCAAATATGGCTTGACCATAGGAGTAGGAATACCTGGATTCTTGTGTATAATTGGGCTTTGTTGCTGTGTTTGTGGTAA	816	0.4461	MATLAQFYLLLLIFLFPLKNTRGELICASISCGEIDIHFPFSLNGANQSHQCSYPRFQLSCDNHGRTILTLSGSGDLVVKGINYEDQTIQVNDPNGCLAKRFLQNNLSHSVSPPFMFDASVYELYDLTFLRCPSNITESYPLPPISCLSSVNYSTVIFSWWSPSDSSSPSHKCEVISSATVPIPNPNMATSLFSPDLSHDIQLKWKKPECGDCEARGQVCGFTDPRTLQVGCFSSPNQAQGFVKKCQIWLDHRSRNTWILVYNWALLLCLW.	272

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca10g00258	271	PANTHER	RING/U-BOX SUPERFAMILY PROTEIN	6	248	IPR046948	-
	Seca10g00258	271	Pfam	Wall-associated receptor kinase galacturonan-binding	27	93	IPR025287	GO:0030247
	Seca10g00258	271	Pfam	Wall-associated receptor kinase C-terminal	167	234	IPR032872	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca10g00258	Seca-Chr10	2217456	2219010	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca10g00258	27	233	C3H Transcription Factor Family	AT2G46495	36.019	1.99e-28	109

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca10g00258	-		-	ahf:112732430	215.312