Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00213 ATGGTTAAACACAACAACATTATCCCAAATGGACAGTTCCTGAAACACTGGCAGAACTATGTGAAGACATGGTTTAATCAACCTGCCAGGAAAACCCGCAGACGACTTGCAAGACAGAAGAAAGCTGTGAAAATCTTCCCTCATCCAACTGCTGGGCCACTCCGTCCCATAGTTCATGGCCAGACTCTGAAATATAATATGAAAGTGAGGGCTGGCAGGGGTTTCTCTTTGGAAGAATTGAAGAGTCTTCAGGCTAATGTTCAGAGGTTGAAGACATACAAGGCGAAGTTAGTTGCCTTCCCAAGACTATCTAGGAAATTTAAGAATGGTGACTCTGCTCCAAAGGAGCTAGCTACAGCAACACAGGTCCAGGGTCTGTACATGCCCATTGTACGCGAGAGGCCATCTGTGGAGTTTACAAAAGTTACTAATGAGATGAAGTCATTCAAGGCATACTATAAACTGCGTCTAGAGAGGACGAACCAGCGTCACATGGGTGCAAGGTTGAAGAAAGTTGCTGAGGCTGAGAAGGAAGAGAAGAAGTAA 546 0.4505 MVKHNNIIPNGQFLKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPHPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKSLQANVQRLKTYKAKLVAFPRLSRKFKNGDSAPKELATATQVQGLYMPIVRERPSVEFTKVTNEMKSFKAYYKLRLERTNQRHMGARLKKVAEAEKEEKK. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00213 181 Gene3D - 141 181 - -
Seca10g00213 181 FunFam 60S ribosomal protein L13 140 181 - -
Seca10g00213 181 Pfam Ribosomal protein L13e 82 159 IPR001380 GO:0003735|GO:0005840|GO:0006412
Seca10g00213 181 Pfam Ribosomal protein L13e 8 81 IPR001380 GO:0003735|GO:0005840|GO:0006412
Seca10g00213 181 PANTHER 60S RIBOSOMAL PROTEIN L13 82 181 IPR001380 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00213 Seca-Chr10 1874759 1876215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00213 2 166 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 67.539 7.87e-92 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00213 K02873 - rvl:131319923 289.656