Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00163 ATGGATACAGTGAGTTGTGTCCTAATCCTCCTTTTGACATGCGCTGTCCTACATTCACTGCTTGCAAGAAGAACCAAAGCAAACTCCAAGCTTCCACCACCAGGGCCCTCCCCTTTACCCATCTTTGGAAACATCCTCAAGTTGGGTAAAAAGCCACACCAATCCCTGGCCCATCTTGCGAAAATCCACGGCCCAATAATGAGTTTAAAGCTAGGCCAAGTAACTACCATAATAATCTCTTCAGCAAACATGTCCAAAGAGGTTCTCCAAACCCATGATCTGTTATTTTCAGACCGAACTGTGCCCCATGCTGTCACAGTTCACAACCATGACCACTATAGCTTGGCCTTTCTCCCTGTTTCACCTCTCTGGCGAGACATGAGAAAAATATGCAACAATCAATTATTCTCCAACAAAACTCTCGATGCAAGCCAATACCTTAGGCGTAGGAAAATGCAAGAACTCCTCAATGATGTCCATCAAAGCAGCCTAAAAGGTGAAGCAGTAGATATTGGGAGAGCAGCTTTCAAGACTTCCATCAACTTCTTATCAAACACCATTTTTTCTATGGATTTTGTTCACTCAACAAGTGACACTGGAGAGTACAAGGACATAGTGGTGAACATCTTGAAAGCCGTTGGAGCACCAAACATGGCTGATTTTTTCCCAATATTGAAGATGGTTGACCCACAGGGGATTAAAAGGCGTTGTGCGTTTTATGTTGGCAAGTTGTTCCATGTATTTGGCAACTTAATTGATCAGAGGTTGAAGTTAAGACAAGAGAAAGATTTTGTCACCAACAATGACATGCTAGATGCATTGCTTGATATTTCTGAAGAAAACAGCCACGAGATGGACAAAGAAAAGATTGAACATTTACTTCATGATCTACTTGTTGCGGGAACGGATACAACTTCATATACATTAGAATGGGCAATGGCTGAGCTACTTCACAATCCAAATACTCTGTTAAAAGCAAGAAAAGAACTTGAAGAAACTGTTGGATTTGGTAACCAAGTTGAGGAATCTGACATTGCTAGGCTTCCTTACTTACAAGCAATAATAAAAGAGACCTTACGGTTACATCCACCAGCTCCATTCTTACTCCCTCGGAAGGCCAAGGTAGATGTGGAACTAAATGGCTACATAATTTCAAAGGGTGCACAGGTTCTGGTTAATGAGTGGGCTATTGGGAGGGATTCAAGAGTGTGGGATAATCCAAACATGTTTTCACCAGAGAGGTTTATAGGGTCGAAAGTTGATATAAAGGGCCAAAGTTTTGAGGTGACACCATTTGGGAGTGGGAGAAGGATATGCCCTGGCATGCCATTGGCTATCAGGATGTTACACTTGATGTTGGGATCATTAGTGAATTCTTTTGATTGGAAGCTTGAAAATGGTATCAAAGTGGAAGACATGGACATGGAAGATGCAGTACAGGGAAATGCCTTGAGAAAAAAGGAACCATTACGAGTTGTTCCAATCAAAATAAATAATTAA 1500 0.416 MDTVSCVLILLLTCAVLHSLLARRTKANSKLPPPGPSPLPIFGNILKLGKKPHQSLAHLAKIHGPIMSLKLGQVTTIIISSANMSKEVLQTHDLLFSDRTVPHAVTVHNHDHYSLAFLPVSPLWRDMRKICNNQLFSNKTLDASQYLRRRKMQELLNDVHQSSLKGEAVDIGRAAFKTSINFLSNTIFSMDFVHSTSDTGEYKDIVVNILKAVGAPNMADFFPILKMVDPQGIKRRCAFYVGKLFHVFGNLIDQRLKLRQEKDFVTNNDMLDALLDISEENSHEMDKEKIEHLLHDLLVAGTDTTSYTLEWAMAELLHNPNTLLKARKELEETVGFGNQVEESDIARLPYLQAIIKETLRLHPPAPFLLPRKAKVDVELNGYIISKGAQVLVNEWAIGRDSRVWDNPNMFSPERFIGSKVDIKGQSFEVTPFGSGRRICPGMPLAIRMLHLMLGSLVNSFDWKLENGIKVEDMDMEDAVQGNALRKKEPLRVVPIKINN. 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00163 499 Pfam Cytochrome P450 33 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00163 499 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00163 499 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00163 499 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00163 499 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00163 499 Gene3D Cytochrome P450 22 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00163 499 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 496 - -
Seca10g00163 499 FunFam Cytochrome P450 76C4 23 493 - -
Seca10g00163 499 CDD CYP76-like 60 494 - -
Seca10g00163 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Seca10g00163 499 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00163 499 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00163 499 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00163 499 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00163 499 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00163 499 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00163 499 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00163 499 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00163 499 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g00163 499 SUPERFAMILY Cytochrome P450 33 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00163 Seca-Chr10 1529867 1532119 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g00163 1 496 Cytochrome P450 AT2G45550 44.970 1.52e-163 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00163 - - gmx:100792017 651.744