Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00151 ATGGTTAGTATTATAAGTACCAACAATCAATGCAACCCCTCTCACATATACCACACATGGGGGGCTGGAGAAGGTGCAGTTGAGGTGAGAGGTCTCAAAGAAGAAGATGGTGTTGGAGAGAATGAAGAAGAAAACAAATGGCCACCATGGCTGAGGCCACTTCTCCAAACAAGCTTCTTTGTTCAATGCAAAGTCCACGCAGATTCCCACAAAAGCGAATGCAATATGTATTGCTTGGACTGTATGAATGGAGCCCTTTGCTCTGCCTGTTTGGCATCTCACAGAGAACACAGAGCTATTCAGATAAGGAGGTCTTCATACCATGATGTGATACGGGTGTCCGAGATACAGAAATTTCTGGACATAACAGGGGTACAAACTTACATTATAAACAGTGCCAAGATTGTGTTCTTGAATGAAAGGCCTCAGCCTAGGCCTGGCAAAGGAGTCACCAATACCTGCCACGTCTGTGAGCGCAGCCTCCTTGATTCCTTCAGCTTCTGCTCTCTTGGCTGTAAGATAGTTGGAACCTCCAAGGAGTTCCGGAAGAAGAAAATGTTAGGTGAGACAGATGGTGAGGAATCAATAAATGGTGGAAGTGGCAGAAACAAAATAATCCAGAGCTTTACACCATCAACACCGCCACCAACAGTGGTGAGTTACAGAACTGCTAAGAGAAGGAAGGGAGTCCCACGTAGAGCTCCAATGGGGGGAGGACTCATTATAGAATACTAA 735 0.4558 MVSIISTNNQCNPSHIYHTWGAGEGAVEVRGLKEEDGVGENEEENKWPPWLRPLLQTSFFVQCKVHADSHKSECNMYCLDCMNGALCSACLASHREHRAIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCHVCERSLLDSFSFCSLGCKIVGTSKEFRKKKMLGETDGEESINGGSGRNKIIQSFTPSTPPPTVVSYRTAKRRKGVPRRAPMGGGLIIEY. 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00151 244 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 41 236 - -
Seca10g00151 244 MobiDBLite consensus disorder prediction 189 217 - -
Seca10g00151 244 Pfam PLATZ transcription factor 103 174 IPR006734 -
Seca10g00151 244 MobiDBLite consensus disorder prediction 196 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00151 Seca-Chr10 1418269 1420812 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca10g00151 PLATZ 6.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00151 - - gmx:100792668 389.423